Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPHK1Q9NYA1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
SPHK1Q9NYA1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SPHK1Q9NYA1 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 CYP2T1P-201ENST00000432607 1285 ntBASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SPHK1Q9NYA1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SPHK1Q9NYA1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 NCF1B-203ENST00000435988 1254 ntBASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 AL591742.1-201ENST00000604433 565 ntBASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 AC016405.3-201ENST00000607710 860 ntBASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 AC026310.3-201ENST00000625186 2373 ntBASIC20.05■□□□□ 0.8
SPHK1Q9NYA1 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 CLDN5-201ENST00000403084 2357 ntBASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SPHK1Q9NYA1 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 AF106564.1-201ENST00000607058 2553 ntBASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 FEM1AP4-201ENST00000443167 1987 ntBASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 ID1-201ENST00000376105 1233 ntBASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 HLA-L-209ENST00000420110 1011 ntBASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.03■□□□□ 0.8
SPHK1Q9NYA1 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 AC083906.2-201ENST00000511578 360 ntBASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.02■□□□□ 0.8
SPHK1Q9NYA1 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms