Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CUEDC1Q9NWM3 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CUEDC1Q9NWM3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 MFSD11-216ENST00000590393 1141 ntBASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 RAP2CP1-201ENST00000605103 478 ntBASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.08■□□□□ 0.81
CUEDC1Q9NWM3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
CUEDC1Q9NWM3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 KRT18P11-201ENST00000435214 1283 ntBASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 SLC7A5P1-201ENST00000568957 537 ntBASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 AC011767.1-201ENST00000617410 1153 ntBASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CUEDC1Q9NWM3 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 AL049796.1-201ENST00000565336 1766 ntBASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 AC104771.1-201ENST00000603335 964 ntBASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.06■□□□□ 0.8
CUEDC1Q9NWM3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CUEDC1Q9NWM3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 CDCA4P2-201ENST00000441182 718 ntBASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 AC026185.1-201ENST00000445748 174 ntBASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 AC073111.5-205ENST00000641717 521 ntBASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.04■□□□□ 0.8
CUEDC1Q9NWM3 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms