Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC30.07■■■□□ 2.4
SLC52A1Q9NWF4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SLC52A1Q9NWF4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
SLC52A1Q9NWF4 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SLC52A1Q9NWF4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
SLC52A1Q9NWF4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC30.07■■■□□ 2.4
SLC52A1Q9NWF4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC30.07■■■□□ 2.4
SLC52A1Q9NWF4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC30.07■■■□□ 2.4
SLC52A1Q9NWF4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC30.07■■■□□ 2.4
SLC52A1Q9NWF4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 ECEL1P3-201ENST00000427961 737 ntBASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 AC010542.4-201ENST00000563151 1910 ntBASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC30.06■■■□□ 2.4
SLC52A1Q9NWF4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC30.05■■■□□ 2.4
SLC52A1Q9NWF4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SLC52A1Q9NWF4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
SLC52A1Q9NWF4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC30.05■■■□□ 2.4
SLC52A1Q9NWF4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLC52A1Q9NWF4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC30.05■■■□□ 2.4
SLC52A1Q9NWF4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLC52A1Q9NWF4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC30.05■■■□□ 2.4
SLC52A1Q9NWF4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC30.05■■■□□ 2.4
SLC52A1Q9NWF4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 AC211429.1-201ENST00000415277 523 ntBASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 AC012618.2-201ENST00000428058 849 ntBASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 REXO1L12P-201ENST00000622156 912 ntBASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
SLC52A1Q9NWF4 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 AC233702.5-201ENST00000584107 538 ntBASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC30.03■■■□□ 2.4
SLC52A1Q9NWF4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 FAM210CP-201ENST00000445714 574 ntBASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 AC127496.7-201ENST00000625110 1798 ntBASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
SLC52A1Q9NWF4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC30.01■■■□□ 2.4
SLC52A1Q9NWF4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC30.01■■■□□ 2.4
SLC52A1Q9NWF4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 MTDHP1-201ENST00000605323 784 ntBASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.39
SLC52A1Q9NWF4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 AC133681.1-201ENST00000465482 601 ntBASIC30■■■□□ 2.39
SLC52A1Q9NWF4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 C2orf69P4-201ENST00000565394 541 ntBASIC30■■■□□ 2.39
SLC52A1Q9NWF4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
SLC52A1Q9NWF4 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
SLC52A1Q9NWF4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
SLC52A1Q9NWF4 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC29.99■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms