Protein–RNA interactions for Protein: Q9NW13

RBM28, RNA-binding protein 28, humanhuman

Known RBP Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28Q9NW13 EXOC3-AS1-202ENST00000623673 1663 ntBASIC24.16■■□□□ 1.46
RBM28Q9NW13 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC24.16■■□□□ 1.46
RBM28Q9NW13 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.16■■□□□ 1.46
RBM28Q9NW13 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC24.16■■□□□ 1.46
RBM28Q9NW13 DUX4L16-201ENST00000555130 1264 ntBASIC24.16■■□□□ 1.46
RBM28Q9NW13 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.16■■□□□ 1.46
RBM28Q9NW13 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RBM28Q9NW13 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC24.16■■□□□ 1.46
RBM28Q9NW13 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
RBM28Q9NW13 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RBM28Q9NW13 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RBM28Q9NW13 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
RBM28Q9NW13 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
RBM28Q9NW13 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
RBM28Q9NW13 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RBM28Q9NW13 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC24.15■■□□□ 1.46
RBM28Q9NW13 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RBM28Q9NW13 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RBM28Q9NW13 AC004911.1-201ENST00000416316 871 ntBASIC24.15■■□□□ 1.46
RBM28Q9NW13 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.15■■□□□ 1.46
RBM28Q9NW13 AC091799.1-201ENST00000422823 811 ntBASIC24.15■■□□□ 1.46
RBM28Q9NW13 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
RBM28Q9NW13 AC007322.4-201ENST00000509611 723 ntBASIC24.15■■□□□ 1.46
RBM28Q9NW13 AC013268.1-206ENST00000638368 961 ntBASIC24.15■■□□□ 1.46
RBM28Q9NW13 AC112229.1-201ENST00000639295 961 ntBASIC24.15■■□□□ 1.46
RBM28Q9NW13 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.15■■□□□ 1.46
RBM28Q9NW13 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.15■■□□□ 1.46
RBM28Q9NW13 AC005229.4-201ENST00000610085 2198 ntBASIC24.15■■□□□ 1.46
RBM28Q9NW13 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
RBM28Q9NW13 METTL26-203ENST00000397664 604 ntTSL 2 BASIC24.14■■□□□ 1.45
RBM28Q9NW13 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.14■■□□□ 1.45
RBM28Q9NW13 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC24.14■■□□□ 1.45
RBM28Q9NW13 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC24.14■■□□□ 1.45
RBM28Q9NW13 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.14■■□□□ 1.45
RBM28Q9NW13 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
RBM28Q9NW13 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
RBM28Q9NW13 AC092666.2-201ENST00000613287 246 ntBASIC24.14■■□□□ 1.45
RBM28Q9NW13 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC24.14■■□□□ 1.45
RBM28Q9NW13 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
RBM28Q9NW13 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.13■■□□□ 1.45
RBM28Q9NW13 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
RBM28Q9NW13 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC24.13■■□□□ 1.45
RBM28Q9NW13 PTPA-214ENST00000423100 988 ntTSL 2 BASIC24.13■■□□□ 1.45
RBM28Q9NW13 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC24.13■■□□□ 1.45
RBM28Q9NW13 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
RBM28Q9NW13 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC24.13■■□□□ 1.45
RBM28Q9NW13 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC24.12■■□□□ 1.45
RBM28Q9NW13 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC24.12■■□□□ 1.45
RBM28Q9NW13 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
RBM28Q9NW13 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RBM28Q9NW13 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
RBM28Q9NW13 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
RBM28Q9NW13 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.12■■□□□ 1.45
RBM28Q9NW13 MDK-213ENST00000617138 635 ntTSL 2 BASIC24.12■■□□□ 1.45
RBM28Q9NW13 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RBM28Q9NW13 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
RBM28Q9NW13 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RBM28Q9NW13 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
RBM28Q9NW13 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
RBM28Q9NW13 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
RBM28Q9NW13 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RBM28Q9NW13 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC24.11■■□□□ 1.45
RBM28Q9NW13 AC080038.1-201ENST00000611274 1154 ntBASIC24.11■■□□□ 1.45
RBM28Q9NW13 AC231657.2-201ENST00000624556 255 ntBASIC24.11■■□□□ 1.45
RBM28Q9NW13 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC24.11■■□□□ 1.45
RBM28Q9NW13 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
RBM28Q9NW13 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC24.11■■□□□ 1.45
RBM28Q9NW13 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.1■■□□□ 1.45
RBM28Q9NW13 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC24.1■■□□□ 1.45
RBM28Q9NW13 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC24.1■■□□□ 1.45
RBM28Q9NW13 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC24.1■■□□□ 1.45
RBM28Q9NW13 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 CNN2P6-201ENST00000439038 900 ntBASIC24.1■■□□□ 1.45
RBM28Q9NW13 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.1■■□□□ 1.45
RBM28Q9NW13 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.1■■□□□ 1.45
RBM28Q9NW13 VPS53-216ENST00000574029 585 ntTSL 4 BASIC24.1■■□□□ 1.45
RBM28Q9NW13 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.1■■□□□ 1.45
RBM28Q9NW13 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
RBM28Q9NW13 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
RBM28Q9NW13 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.09■■□□□ 1.45
RBM28Q9NW13 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC24.09■■□□□ 1.45
RBM28Q9NW13 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC24.09■■□□□ 1.45
RBM28Q9NW13 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RBM28Q9NW13 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RBM28Q9NW13 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC24.09■■□□□ 1.45
RBM28Q9NW13 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC24.09■■□□□ 1.45
RBM28Q9NW13 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC24.09■■□□□ 1.45
RBM28Q9NW13 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.09■■□□□ 1.45
RBM28Q9NW13 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC24.09■■□□□ 1.45
RBM28Q9NW13 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
RBM28Q9NW13 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC24.09■■□□□ 1.45
RBM28Q9NW13 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms