Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF3Q9NR23 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
GDF3Q9NR23 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF3Q9NR23 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF3Q9NR23 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF3Q9NR23 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF3Q9NR23 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GDF3Q9NR23 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF3Q9NR23 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF3Q9NR23 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
GDF3Q9NR23 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.9■■□□□ 1.1
GDF3Q9NR23 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDF3Q9NR23 LINC02228-203ENST00000641970 1355 ntBASIC21.9■■□□□ 1.1
GDF3Q9NR23 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDF3Q9NR23 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDF3Q9NR23 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDF3Q9NR23 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GDF3Q9NR23 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC21.9■■□□□ 1.1
GDF3Q9NR23 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDF3Q9NR23 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
GDF3Q9NR23 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
GDF3Q9NR23 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
GDF3Q9NR23 AC003102.1-202ENST00000563394 1796 ntBASIC21.89■■□□□ 1.1
GDF3Q9NR23 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.89■■□□□ 1.1
GDF3Q9NR23 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
GDF3Q9NR23 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GDF3Q9NR23 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.09
GDF3Q9NR23 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.89■■□□□ 1.09
GDF3Q9NR23 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.89■■□□□ 1.09
GDF3Q9NR23 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GDF3Q9NR23 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GDF3Q9NR23 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.89■■□□□ 1.09
GDF3Q9NR23 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GDF3Q9NR23 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
GDF3Q9NR23 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GDF3Q9NR23 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
GDF3Q9NR23 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.89■■□□□ 1.09
GDF3Q9NR23 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.89■■□□□ 1.09
GDF3Q9NR23 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
GDF3Q9NR23 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.88■■□□□ 1.09
GDF3Q9NR23 MPST-204ENST00000404393 1329 ntTSL 5 BASIC21.88■■□□□ 1.09
GDF3Q9NR23 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.88■■□□□ 1.09
GDF3Q9NR23 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 KRT18P14-201ENST00000534205 1250 ntBASIC21.88■■□□□ 1.09
GDF3Q9NR23 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
GDF3Q9NR23 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.88■■□□□ 1.09
GDF3Q9NR23 PLK5-205ENST00000642079 1969 ntBASIC21.88■■□□□ 1.09
GDF3Q9NR23 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.88■■□□□ 1.09
GDF3Q9NR23 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.88■■□□□ 1.09
GDF3Q9NR23 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
GDF3Q9NR23 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GDF3Q9NR23 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 AC092437.1-201ENST00000624794 1048 ntBASIC21.87■■□□□ 1.09
GDF3Q9NR23 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
GDF3Q9NR23 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.87■■□□□ 1.09
GDF3Q9NR23 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
GDF3Q9NR23 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.86■■□□□ 1.09
GDF3Q9NR23 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
GDF3Q9NR23 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC21.86■■□□□ 1.09
GDF3Q9NR23 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.86■■□□□ 1.09
GDF3Q9NR23 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC21.86■■□□□ 1.09
GDF3Q9NR23 TERF1P2-201ENST00000583350 1212 ntBASIC21.86■■□□□ 1.09
GDF3Q9NR23 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC21.86■■□□□ 1.09
GDF3Q9NR23 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
GDF3Q9NR23 NTF6G-201ENST00000591094 616 ntBASIC21.86■■□□□ 1.09
GDF3Q9NR23 AC105233.4-201ENST00000642045 216 ntBASIC21.86■■□□□ 1.09
GDF3Q9NR23 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms