Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.65■□□□□ 0.9
SSU72Q9NP77 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.65■□□□□ 0.9
SSU72Q9NP77 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSU72Q9NP77 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SSU72Q9NP77 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SSU72Q9NP77 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
SSU72Q9NP77 SMG8-203ENST00000578922 2178 ntBASIC20.64■□□□□ 0.89
SSU72Q9NP77 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSU72Q9NP77 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSU72Q9NP77 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.64■□□□□ 0.89
SSU72Q9NP77 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.64■□□□□ 0.89
SSU72Q9NP77 DUX4L19-201ENST00000557448 1267 ntBASIC20.64■□□□□ 0.89
SSU72Q9NP77 AL512631.2-201ENST00000604634 923 ntBASIC20.64■□□□□ 0.89
SSU72Q9NP77 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSU72Q9NP77 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.64■□□□□ 0.89
SSU72Q9NP77 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSU72Q9NP77 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSU72Q9NP77 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSU72Q9NP77 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.63■□□□□ 0.89
SSU72Q9NP77 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSU72Q9NP77 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.63■□□□□ 0.89
SSU72Q9NP77 AC009237.3-201ENST00000393279 1427 ntBASIC20.63■□□□□ 0.89
SSU72Q9NP77 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.63■□□□□ 0.89
SSU72Q9NP77 AC055733.4-201ENST00000638462 1354 ntBASIC20.63■□□□□ 0.89
SSU72Q9NP77 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSU72Q9NP77 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSU72Q9NP77 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSU72Q9NP77 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.63■□□□□ 0.89
SSU72Q9NP77 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.63■□□□□ 0.89
SSU72Q9NP77 RARRES2P1-201ENST00000474487 481 ntBASIC20.63■□□□□ 0.89
SSU72Q9NP77 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.63■□□□□ 0.89
SSU72Q9NP77 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.63■□□□□ 0.89
SSU72Q9NP77 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.63■□□□□ 0.89
SSU72Q9NP77 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSU72Q9NP77 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSU72Q9NP77 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.63■□□□□ 0.89
SSU72Q9NP77 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSU72Q9NP77 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSU72Q9NP77 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.62■□□□□ 0.89
SSU72Q9NP77 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.62■□□□□ 0.89
SSU72Q9NP77 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.62■□□□□ 0.89
SSU72Q9NP77 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSU72Q9NP77 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.62■□□□□ 0.89
SSU72Q9NP77 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSU72Q9NP77 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSU72Q9NP77 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSU72Q9NP77 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSU72Q9NP77 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSU72Q9NP77 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SSU72Q9NP77 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SSU72Q9NP77 AC133561.4-201ENST00000566112 224 ntBASIC20.61■□□□□ 0.89
SSU72Q9NP77 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 TCF3P1-201ENST00000423021 1937 ntBASIC20.61■□□□□ 0.89
SSU72Q9NP77 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SSU72Q9NP77 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
SSU72Q9NP77 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
SSU72Q9NP77 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSU72Q9NP77 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSU72Q9NP77 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.6■□□□□ 0.89
SSU72Q9NP77 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.6■□□□□ 0.89
SSU72Q9NP77 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
SSU72Q9NP77 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SSU72Q9NP77 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SSU72Q9NP77 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSU72Q9NP77 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.6■□□□□ 0.89
SSU72Q9NP77 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SSU72Q9NP77 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.59■□□□□ 0.89
SSU72Q9NP77 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
SSU72Q9NP77 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSU72Q9NP77 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSU72Q9NP77 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSU72Q9NP77 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
SSU72Q9NP77 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
SSU72Q9NP77 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms