Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SND1-IT1Q9HBX3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 AC006128.1-201ENST00000624704 1661 ntBASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 TSPY9P-201ENST00000440215 945 ntBASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 TSPY11P-201ENST00000442607 1045 ntBASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC13.88□□□□□ -0.19
SND1-IT1Q9HBX3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 LSM4-201ENST00000252816 986 ntTSL 2 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 AC087239.1-201ENST00000622671 572 ntBASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SND1-IT1Q9HBX3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 pRNA.6-201ENST00000610482 90 ntBASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 pRNA.5-201ENST00000612139 90 ntBASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 pRNA.11-201ENST00000618423 90 ntBASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 pRNA.13-201ENST00000619112 90 ntBASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.86□□□□□ -0.19
SND1-IT1Q9HBX3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms