Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC104187.1-201ENST00000607510 612 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 AC120498.10-201ENST00000621827 505 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 DUX4L6-201ENST00000626483 1275 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 DUX4L1-201ENST00000627662 1275 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 DUX4L8-201ENST00000629013 1275 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 DUX4L3-201ENST00000630187 1275 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 DUX4L7-201ENST00000630678 1275 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 DUX4L5-201ENST00000630834 1275 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 KRT16P2-201ENST00000414673 1423 ntBASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.09■□□□□ 0.97
LRRC40Q9H9A6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 PLK5-205ENST00000642079 1969 ntBASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.08■□□□□ 0.97
LRRC40Q9H9A6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC40Q9H9A6 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC40Q9H9A6 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC40Q9H9A6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
LRRC40Q9H9A6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC40Q9H9A6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
LRRC40Q9H9A6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC21.08■□□□□ 0.96
LRRC40Q9H9A6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LRRC40Q9H9A6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 AP001160.3-201ENST00000601484 763 ntBASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 AL157384.1-201ENST00000445995 2473 ntBASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
LRRC40Q9H9A6 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LRRC40Q9H9A6 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LRRC40Q9H9A6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms