Protein–RNA interactions for Protein: Q9H267

VPS33B, Vacuolar protein sorting-associated protein 33B, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33BQ9H267 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
VPS33BQ9H267 MTDHP1-201ENST00000605323 784 ntBASIC25.27■■□□□ 1.64
VPS33BQ9H267 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
VPS33BQ9H267 C11orf96-202ENST00000528572 1834 ntBASIC25.27■■□□□ 1.64
VPS33BQ9H267 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS33BQ9H267 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
VPS33BQ9H267 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC25.27■■□□□ 1.64
VPS33BQ9H267 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
VPS33BQ9H267 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
VPS33BQ9H267 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC25.26■■□□□ 1.63
VPS33BQ9H267 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC25.26■■□□□ 1.63
VPS33BQ9H267 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
VPS33BQ9H267 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC25.26■■□□□ 1.63
VPS33BQ9H267 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
VPS33BQ9H267 NARF-205ENST00000412079 1760 ntTSL 5 BASIC25.26■■□□□ 1.63
VPS33BQ9H267 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.26■■□□□ 1.63
VPS33BQ9H267 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC25.25■■□□□ 1.63
VPS33BQ9H267 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
VPS33BQ9H267 C2orf69P4-201ENST00000565394 541 ntBASIC25.25■■□□□ 1.63
VPS33BQ9H267 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC25.25■■□□□ 1.63
VPS33BQ9H267 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
VPS33BQ9H267 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
VPS33BQ9H267 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
VPS33BQ9H267 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC25.24■■□□□ 1.63
VPS33BQ9H267 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
VPS33BQ9H267 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.24■■□□□ 1.63
VPS33BQ9H267 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
VPS33BQ9H267 AL135905.2-201ENST00000584934 1404 ntBASIC25.24■■□□□ 1.63
VPS33BQ9H267 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC25.24■■□□□ 1.63
VPS33BQ9H267 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC25.24■■□□□ 1.63
VPS33BQ9H267 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
VPS33BQ9H267 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC25.23■■□□□ 1.63
VPS33BQ9H267 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 STX5-203ENST00000394690 1568 ntTSL 5 BASIC25.23■■□□□ 1.63
VPS33BQ9H267 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC25.23■■□□□ 1.63
VPS33BQ9H267 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.23■■□□□ 1.63
VPS33BQ9H267 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
VPS33BQ9H267 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC25.23■■□□□ 1.63
VPS33BQ9H267 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC25.23■■□□□ 1.63
VPS33BQ9H267 AC124016.1-201ENST00000609552 612 ntBASIC25.23■■□□□ 1.63
VPS33BQ9H267 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC25.23■■□□□ 1.63
VPS33BQ9H267 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
VPS33BQ9H267 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VPS33BQ9H267 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VPS33BQ9H267 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
VPS33BQ9H267 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC25.22■■□□□ 1.63
VPS33BQ9H267 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VPS33BQ9H267 LY6E-205ENST00000519611 635 ntTSL 3 BASIC25.22■■□□□ 1.63
VPS33BQ9H267 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC25.22■■□□□ 1.63
VPS33BQ9H267 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC25.22■■□□□ 1.63
VPS33BQ9H267 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VPS33BQ9H267 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS33BQ9H267 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS33BQ9H267 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
VPS33BQ9H267 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VPS33BQ9H267 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
VPS33BQ9H267 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS33BQ9H267 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS33BQ9H267 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS33BQ9H267 SERF2-207ENST00000409614 582 ntTSL 2 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 ABHD17AP6-201ENST00000458502 1044 ntBASIC25.21■■□□□ 1.63
VPS33BQ9H267 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 AC010331.1-201ENST00000611423 582 ntBASIC25.21■■□□□ 1.63
VPS33BQ9H267 AL049637.2-201ENST00000641778 930 ntBASIC25.21■■□□□ 1.63
VPS33BQ9H267 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS33BQ9H267 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
VPS33BQ9H267 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.21■■□□□ 1.63
VPS33BQ9H267 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
VPS33BQ9H267 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
VPS33BQ9H267 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC25.2■■□□□ 1.62
VPS33BQ9H267 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
VPS33BQ9H267 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC25.2■■□□□ 1.62
VPS33BQ9H267 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
VPS33BQ9H267 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms