Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.61■■□□□ 1.05
RNF38Q9H0F5 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF38Q9H0F5 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RNF38Q9H0F5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.61■■□□□ 1.05
RNF38Q9H0F5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF38Q9H0F5 CDV3P1-201ENST00000471403 739 ntBASIC21.61■■□□□ 1.05
RNF38Q9H0F5 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.61■■□□□ 1.05
RNF38Q9H0F5 MYC-209ENST00000641252 345 ntBASIC21.61■■□□□ 1.05
RNF38Q9H0F5 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
RNF38Q9H0F5 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.61■■□□□ 1.05
RNF38Q9H0F5 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 VMO1-204ENST00000441199 741 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 AC083880.1-201ENST00000608266 535 ntBASIC21.6■■□□□ 1.05
RNF38Q9H0F5 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 AC012676.1-201ENST00000574705 1949 ntBASIC21.6■■□□□ 1.05
RNF38Q9H0F5 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
RNF38Q9H0F5 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RNF38Q9H0F5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.58■■□□□ 1.05
RNF38Q9H0F5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 AC091874.3-201ENST00000512672 1195 ntBASIC21.58■■□□□ 1.05
RNF38Q9H0F5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
RNF38Q9H0F5 KRT17P1-201ENST00000399211 1546 ntBASIC21.58■■□□□ 1.04
RNF38Q9H0F5 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF38Q9H0F5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
RNF38Q9H0F5 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.04
RNF38Q9H0F5 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.58■■□□□ 1.04
RNF38Q9H0F5 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 DUSP5P2-201ENST00000426873 1033 ntBASIC21.57■■□□□ 1.04
RNF38Q9H0F5 AC097658.1-201ENST00000475555 843 ntBASIC21.57■■□□□ 1.04
RNF38Q9H0F5 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 TMEM191A-211ENST00000637163 1067 ntBASIC21.57■■□□□ 1.04
RNF38Q9H0F5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
RNF38Q9H0F5 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.56■■□□□ 1.04
RNF38Q9H0F5 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 AC007322.3-201ENST00000426526 701 ntBASIC21.56■■□□□ 1.04
RNF38Q9H0F5 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.56■■□□□ 1.04
RNF38Q9H0F5 RNA5SP413-201ENST00000516373 109 ntBASIC21.56■■□□□ 1.04
RNF38Q9H0F5 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms