Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 PLK5-205ENST00000642079 1969 ntBASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
FOXP3Q9BZS1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 AC092667.1-201ENST00000434301 2586 ntBASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 RARRES2P11-201ENST00000635158 484 ntBASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
FOXP3Q9BZS1 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 AL137784.2-201ENST00000607332 1000 ntBASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 AL354811.1-201ENST00000610286 706 ntBASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
FOXP3Q9BZS1 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 AC123595.1-201ENST00000440769 1046 ntBASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
FOXP3Q9BZS1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXP3Q9BZS1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXP3Q9BZS1 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
FOXP3Q9BZS1 AC121338.2-201ENST00000622535 1744 ntBASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
FOXP3Q9BZS1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 CCDC92B-201ENST00000575506 885 ntBASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 AC092437.1-201ENST00000624794 1048 ntBASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 AC073314.1-201ENST00000568729 2216 ntBASIC21.38■■□□□ 1.01
FOXP3Q9BZS1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms