Protein–RNA interactions for Protein: Q9BVG3

TRIM62, E3 ubiquitin-protein ligase TRIM62, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM62Q9BVG3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.71■■□□□ 1.07
TRIM62Q9BVG3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM62Q9BVG3 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.71■■□□□ 1.07
TRIM62Q9BVG3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
TRIM62Q9BVG3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
TRIM62Q9BVG3 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
TRIM62Q9BVG3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.07
TRIM62Q9BVG3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
TRIM62Q9BVG3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 AC091799.1-201ENST00000422823 811 ntBASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 CNN2P6-201ENST00000439038 900 ntBASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC21.7■■□□□ 1.06
TRIM62Q9BVG3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 AL049796.1-201ENST00000565336 1766 ntBASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 CDCA4P2-201ENST00000441182 718 ntBASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.69■■□□□ 1.06
TRIM62Q9BVG3 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRIM62Q9BVG3 FEM1AP4-201ENST00000443167 1987 ntBASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 SAPCD2P1-201ENST00000395413 1184 ntBASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 RAP2CP1-201ENST00000605103 478 ntBASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 AL024507.2-201ENST00000606070 2574 ntBASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC21.67■■□□□ 1.06
TRIM62Q9BVG3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 AC116050.2-201ENST00000612102 1779 ntBASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 AC007322.3-201ENST00000426526 701 ntBASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 AC069236.1-201ENST00000604339 616 ntBASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 AC005181.1-201ENST00000604782 1256 ntBASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 FAM21FP-204ENST00000608637 956 ntBASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 AC008694.1-202ENST00000636953 945 ntBASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRIM62Q9BVG3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
TRIM62Q9BVG3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM62Q9BVG3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM62Q9BVG3 AC068338.2-201ENST00000563278 1430 ntBASIC21.64■■□□□ 1.06
TRIM62Q9BVG3 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRIM62Q9BVG3 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms