Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC112229.1-201ENST00000639295 961 ntBASIC18.47■□□□□ 0.55
USB1Q9BQ65 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USB1Q9BQ65 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.47■□□□□ 0.55
USB1Q9BQ65 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USB1Q9BQ65 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USB1Q9BQ65 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USB1Q9BQ65 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USB1Q9BQ65 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USB1Q9BQ65 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USB1Q9BQ65 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.46■□□□□ 0.55
USB1Q9BQ65 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USB1Q9BQ65 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USB1Q9BQ65 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.46■□□□□ 0.55
USB1Q9BQ65 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USB1Q9BQ65 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.46■□□□□ 0.55
USB1Q9BQ65 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC18.46■□□□□ 0.55
USB1Q9BQ65 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.46■□□□□ 0.55
USB1Q9BQ65 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.46■□□□□ 0.55
USB1Q9BQ65 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC18.46■□□□□ 0.55
USB1Q9BQ65 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.46■□□□□ 0.55
USB1Q9BQ65 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USB1Q9BQ65 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USB1Q9BQ65 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USB1Q9BQ65 AC242852.2-201ENST00000615738 1807 ntBASIC18.46■□□□□ 0.55
USB1Q9BQ65 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USB1Q9BQ65 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
USB1Q9BQ65 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
USB1Q9BQ65 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
USB1Q9BQ65 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USB1Q9BQ65 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USB1Q9BQ65 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USB1Q9BQ65 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USB1Q9BQ65 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.45■□□□□ 0.54
USB1Q9BQ65 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USB1Q9BQ65 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USB1Q9BQ65 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USB1Q9BQ65 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USB1Q9BQ65 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USB1Q9BQ65 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 NCF1B-203ENST00000435988 1254 ntBASIC18.44■□□□□ 0.54
USB1Q9BQ65 TERF1P5-201ENST00000477545 1207 ntBASIC18.44■□□□□ 0.54
USB1Q9BQ65 AC007322.4-201ENST00000509611 723 ntBASIC18.44■□□□□ 0.54
USB1Q9BQ65 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.44■□□□□ 0.54
USB1Q9BQ65 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USB1Q9BQ65 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
USB1Q9BQ65 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USB1Q9BQ65 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USB1Q9BQ65 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
USB1Q9BQ65 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
USB1Q9BQ65 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
USB1Q9BQ65 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.42■□□□□ 0.54
USB1Q9BQ65 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USB1Q9BQ65 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
USB1Q9BQ65 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.42■□□□□ 0.54
USB1Q9BQ65 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
USB1Q9BQ65 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
USB1Q9BQ65 CROCCP5-201ENST00000436658 830 ntBASIC18.42■□□□□ 0.54
USB1Q9BQ65 AC005181.1-201ENST00000604782 1256 ntBASIC18.42■□□□□ 0.54
USB1Q9BQ65 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
USB1Q9BQ65 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.42■□□□□ 0.54
USB1Q9BQ65 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms