Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL024507.2-201ENST00000606070 2574 ntBASIC21.91■■□□□ 1.1
SMOQ99835 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.9■■□□□ 1.1
SMOQ99835 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.9■■□□□ 1.1
SMOQ99835 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.9■■□□□ 1.1
SMOQ99835 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.9■■□□□ 1.1
SMOQ99835 AF201337.1-201ENST00000520239 748 ntBASIC21.9■■□□□ 1.1
SMOQ99835 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.9■■□□□ 1.1
SMOQ99835 AC105036.2-201ENST00000569468 176 ntBASIC21.9■■□□□ 1.1
SMOQ99835 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
SMOQ99835 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.9■■□□□ 1.1
SMOQ99835 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SMOQ99835 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.89■■□□□ 1.1
SMOQ99835 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
SMOQ99835 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC21.89■■□□□ 1.1
SMOQ99835 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMOQ99835 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SMOQ99835 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
SMOQ99835 TSPY6P-201ENST00000448518 926 ntBASIC21.89■■□□□ 1.09
SMOQ99835 AC093787.1-201ENST00000450396 207 ntBASIC21.89■■□□□ 1.09
SMOQ99835 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.89■■□□□ 1.09
SMOQ99835 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC21.89■■□□□ 1.09
SMOQ99835 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.89■■□□□ 1.09
SMOQ99835 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMOQ99835 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SMOQ99835 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
SMOQ99835 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
SMOQ99835 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SMOQ99835 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC21.88■■□□□ 1.09
SMOQ99835 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMOQ99835 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.88■■□□□ 1.09
SMOQ99835 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMOQ99835 RARRES2P4-201ENST00000514074 484 ntBASIC21.88■■□□□ 1.09
SMOQ99835 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMOQ99835 AC069236.1-201ENST00000604339 616 ntBASIC21.88■■□□□ 1.09
SMOQ99835 OR10C1-204ENST00000622521 1039 ntBASIC21.88■■□□□ 1.09
SMOQ99835 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SMOQ99835 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
SMOQ99835 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC21.88■■□□□ 1.09
SMOQ99835 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SMOQ99835 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SMOQ99835 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SMOQ99835 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
SMOQ99835 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.87■■□□□ 1.09
SMOQ99835 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
SMOQ99835 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
SMOQ99835 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.87■■□□□ 1.09
SMOQ99835 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SMOQ99835 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMOQ99835 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.86■■□□□ 1.09
SMOQ99835 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.86■■□□□ 1.09
SMOQ99835 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMOQ99835 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMOQ99835 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
SMOQ99835 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMOQ99835 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.86■■□□□ 1.09
SMOQ99835 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.86■■□□□ 1.09
SMOQ99835 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.86■■□□□ 1.09
SMOQ99835 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.86■■□□□ 1.09
SMOQ99835 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.86■■□□□ 1.09
SMOQ99835 AC008694.1-202ENST00000636953 945 ntBASIC21.86■■□□□ 1.09
SMOQ99835 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMOQ99835 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMOQ99835 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
SMOQ99835 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
SMOQ99835 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
SMOQ99835 EXOC3-AS1-202ENST00000623673 1663 ntBASIC21.85■■□□□ 1.09
SMOQ99835 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMOQ99835 FEM1AP4-201ENST00000443167 1987 ntBASIC21.85■■□□□ 1.09
SMOQ99835 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.85■■□□□ 1.09
SMOQ99835 AL512625.2-201ENST00000417533 625 ntBASIC21.85■■□□□ 1.09
SMOQ99835 FAM21FP-204ENST00000608637 956 ntBASIC21.85■■□□□ 1.09
SMOQ99835 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMOQ99835 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
SMOQ99835 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
SMOQ99835 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMOQ99835 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
SMOQ99835 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMOQ99835 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.84■■□□□ 1.09
SMOQ99835 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
SMOQ99835 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.84■■□□□ 1.09
SMOQ99835 CDV3P1-201ENST00000471403 739 ntBASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms