Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL13Q99616 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CCL13Q99616 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
CCL13Q99616 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL13Q99616 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL13Q99616 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL13Q99616 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL13Q99616 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
CCL13Q99616 AC245052.3-201ENST00000450182 901 ntBASIC17.41■□□□□ 0.38
CCL13Q99616 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC17.41■□□□□ 0.38
CCL13Q99616 MFSD11-216ENST00000590393 1141 ntBASIC17.41■□□□□ 0.38
CCL13Q99616 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.41■□□□□ 0.38
CCL13Q99616 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL13Q99616 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
CCL13Q99616 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL13Q99616 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CCL13Q99616 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL13Q99616 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCL13Q99616 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL13Q99616 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
CCL13Q99616 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.41■□□□□ 0.38
CCL13Q99616 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.4■□□□□ 0.38
CCL13Q99616 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCL13Q99616 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC17.4■□□□□ 0.38
CCL13Q99616 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
CCL13Q99616 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL13Q99616 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC17.4■□□□□ 0.38
CCL13Q99616 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CCL13Q99616 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL13Q99616 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.4■□□□□ 0.38
CCL13Q99616 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.4■□□□□ 0.38
CCL13Q99616 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CCL13Q99616 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC17.4■□□□□ 0.38
CCL13Q99616 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CCL13Q99616 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL13Q99616 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.39■□□□□ 0.37
CCL13Q99616 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
CCL13Q99616 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL13Q99616 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.39■□□□□ 0.37
CCL13Q99616 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 FGF8-207ENST00000618991 856 ntTSL 3 BASIC17.39■□□□□ 0.37
CCL13Q99616 AC010536.3-201ENST00000620306 533 ntBASIC17.39■□□□□ 0.37
CCL13Q99616 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.39■□□□□ 0.37
CCL13Q99616 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CCL13Q99616 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.39■□□□□ 0.37
CCL13Q99616 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.39■□□□□ 0.37
CCL13Q99616 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CCL13Q99616 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CCL13Q99616 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL13Q99616 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL13Q99616 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
CCL13Q99616 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL13Q99616 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL13Q99616 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
CCL13Q99616 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.38■□□□□ 0.37
CCL13Q99616 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.38■□□□□ 0.37
CCL13Q99616 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL13Q99616 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.38■□□□□ 0.37
CCL13Q99616 RARRES2P11-201ENST00000635158 484 ntBASIC17.38■□□□□ 0.37
CCL13Q99616 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL13Q99616 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL13Q99616 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
CCL13Q99616 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CCL13Q99616 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CCL13Q99616 RBM17P2-201ENST00000616397 1405 ntBASIC17.38■□□□□ 0.37
CCL13Q99616 AC005229.4-201ENST00000610085 2198 ntBASIC17.38■□□□□ 0.37
CCL13Q99616 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL13Q99616 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL13Q99616 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CCL13Q99616 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CCL13Q99616 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL13Q99616 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC17.37■□□□□ 0.37
CCL13Q99616 DLX3-202ENST00000512495 834 ntTSL 2 BASIC17.37■□□□□ 0.37
CCL13Q99616 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.37■□□□□ 0.37
CCL13Q99616 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.37■□□□□ 0.37
CCL13Q99616 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms