Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 SLC29A4P2-201ENST00000504749 1089 ntBASIC21.05■□□□□ 0.96
PHOX2BQ99453 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHOX2BQ99453 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.05■□□□□ 0.96
PHOX2BQ99453 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.05■□□□□ 0.96
PHOX2BQ99453 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
PHOX2BQ99453 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHOX2BQ99453 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHOX2BQ99453 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHOX2BQ99453 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHOX2BQ99453 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.05■□□□□ 0.96
PHOX2BQ99453 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PHOX2BQ99453 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
PHOX2BQ99453 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.04■□□□□ 0.96
PHOX2BQ99453 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
PHOX2BQ99453 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC21.04■□□□□ 0.96
PHOX2BQ99453 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC21.04■□□□□ 0.96
PHOX2BQ99453 NTF6B-201ENST00000591913 560 ntBASIC21.04■□□□□ 0.96
PHOX2BQ99453 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.04■□□□□ 0.96
PHOX2BQ99453 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC21.04■□□□□ 0.96
PHOX2BQ99453 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
PHOX2BQ99453 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.04■□□□□ 0.96
PHOX2BQ99453 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
PHOX2BQ99453 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
PHOX2BQ99453 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.03■□□□□ 0.96
PHOX2BQ99453 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 KRT18P57-201ENST00000443599 1254 ntBASIC21.03■□□□□ 0.96
PHOX2BQ99453 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.03■□□□□ 0.96
PHOX2BQ99453 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.03■□□□□ 0.96
PHOX2BQ99453 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.03■□□□□ 0.96
PHOX2BQ99453 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.03■□□□□ 0.96
PHOX2BQ99453 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.03■□□□□ 0.96
PHOX2BQ99453 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.03■□□□□ 0.96
PHOX2BQ99453 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.03■□□□□ 0.96
PHOX2BQ99453 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
PHOX2BQ99453 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
PHOX2BQ99453 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.02■□□□□ 0.96
PHOX2BQ99453 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHOX2BQ99453 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
PHOX2BQ99453 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.02■□□□□ 0.96
PHOX2BQ99453 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.02■□□□□ 0.96
PHOX2BQ99453 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
PHOX2BQ99453 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC21.02■□□□□ 0.96
PHOX2BQ99453 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PHOX2BQ99453 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHOX2BQ99453 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.02■□□□□ 0.96
PHOX2BQ99453 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.02■□□□□ 0.96
PHOX2BQ99453 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PHOX2BQ99453 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHOX2BQ99453 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.01■□□□□ 0.95
PHOX2BQ99453 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHOX2BQ99453 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHOX2BQ99453 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.01■□□□□ 0.95
PHOX2BQ99453 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
PHOX2BQ99453 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC21.01■□□□□ 0.95
PHOX2BQ99453 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHOX2BQ99453 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHOX2BQ99453 AC124016.1-201ENST00000609552 612 ntBASIC21.01■□□□□ 0.95
PHOX2BQ99453 MIR6786-201ENST00000616843 113 ntBASIC21.01■□□□□ 0.95
PHOX2BQ99453 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.01■□□□□ 0.95
PHOX2BQ99453 RBM17P2-201ENST00000616397 1405 ntBASIC21.01■□□□□ 0.95
PHOX2BQ99453 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PHOX2BQ99453 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PHOX2BQ99453 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
PHOX2BQ99453 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PHOX2BQ99453 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PHOX2BQ99453 SERF2-207ENST00000409614 582 ntTSL 2 BASIC21■□□□□ 0.95
PHOX2BQ99453 POM121L13P-201ENST00000422362 380 ntBASIC21■□□□□ 0.95
PHOX2BQ99453 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21■□□□□ 0.95
PHOX2BQ99453 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21■□□□□ 0.95
PHOX2BQ99453 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PHOX2BQ99453 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC21■□□□□ 0.95
PHOX2BQ99453 AC005363.2-201ENST00000618631 242 ntBASIC21■□□□□ 0.95
PHOX2BQ99453 AL023875.1-201ENST00000640777 796 ntBASIC21■□□□□ 0.95
PHOX2BQ99453 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PHOX2BQ99453 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms