Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.9■□□□□ 0.62
SPENQ96T58 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.9■□□□□ 0.62
SPENQ96T58 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.9■□□□□ 0.62
SPENQ96T58 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 AC233702.5-201ENST00000584107 538 ntBASIC18.9■□□□□ 0.62
SPENQ96T58 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.9■□□□□ 0.62
SPENQ96T58 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SPENQ96T58 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SPENQ96T58 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SPENQ96T58 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SPENQ96T58 RN7SL850P-201ENST00000579959 291 ntBASIC18.89■□□□□ 0.62
SPENQ96T58 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPENQ96T58 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.89■□□□□ 0.62
SPENQ96T58 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SPENQ96T58 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.89■□□□□ 0.62
SPENQ96T58 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.89■□□□□ 0.62
SPENQ96T58 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPENQ96T58 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPENQ96T58 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.89■□□□□ 0.61
SPENQ96T58 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SPENQ96T58 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPENQ96T58 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SPENQ96T58 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPENQ96T58 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPENQ96T58 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.88■□□□□ 0.61
SPENQ96T58 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.88■□□□□ 0.61
SPENQ96T58 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPENQ96T58 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
SPENQ96T58 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC18.88■□□□□ 0.61
SPENQ96T58 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC18.88■□□□□ 0.61
SPENQ96T58 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.88■□□□□ 0.61
SPENQ96T58 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.88■□□□□ 0.61
SPENQ96T58 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.88■□□□□ 0.61
SPENQ96T58 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.88■□□□□ 0.61
SPENQ96T58 C2orf69P4-201ENST00000565394 541 ntBASIC18.88■□□□□ 0.61
SPENQ96T58 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SPENQ96T58 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPENQ96T58 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.88■□□□□ 0.61
SPENQ96T58 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.88■□□□□ 0.61
SPENQ96T58 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.87■□□□□ 0.61
SPENQ96T58 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.87■□□□□ 0.61
SPENQ96T58 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SPENQ96T58 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.87■□□□□ 0.61
SPENQ96T58 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.87■□□□□ 0.61
SPENQ96T58 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SPENQ96T58 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.87■□□□□ 0.61
SPENQ96T58 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPENQ96T58 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.86■□□□□ 0.61
SPENQ96T58 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPENQ96T58 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SPENQ96T58 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.86■□□□□ 0.61
SPENQ96T58 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.86■□□□□ 0.61
SPENQ96T58 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.86■□□□□ 0.61
SPENQ96T58 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.86■□□□□ 0.61
SPENQ96T58 AC100791.3-201ENST00000617619 330 ntBASIC18.86■□□□□ 0.61
SPENQ96T58 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.86■□□□□ 0.61
SPENQ96T58 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.85■□□□□ 0.61
SPENQ96T58 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SPENQ96T58 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPENQ96T58 RPS2P55-201ENST00000397318 883 ntBASIC18.85■□□□□ 0.61
SPENQ96T58 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms