Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.38■□□□□ 0.53
PCNX1Q96RV3 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCNX1Q96RV3 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PCNX1Q96RV3 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCNX1Q96RV3 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
PCNX1Q96RV3 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCNX1Q96RV3 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCNX1Q96RV3 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.38■□□□□ 0.53
PCNX1Q96RV3 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.38■□□□□ 0.53
PCNX1Q96RV3 AC080038.3-201ENST00000623346 1952 ntBASIC18.37■□□□□ 0.53
PCNX1Q96RV3 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 AL589743.5-201ENST00000616611 1050 ntBASIC18.37■□□□□ 0.53
PCNX1Q96RV3 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.37■□□□□ 0.53
PCNX1Q96RV3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCNX1Q96RV3 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 Z99916.2-201ENST00000604037 246 ntBASIC18.35■□□□□ 0.53
PCNX1Q96RV3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCNX1Q96RV3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.34■□□□□ 0.53
PCNX1Q96RV3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCNX1Q96RV3 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCNX1Q96RV3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCNX1Q96RV3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCNX1Q96RV3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
PCNX1Q96RV3 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.53
PCNX1Q96RV3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCNX1Q96RV3 FAM210CP-201ENST00000445714 574 ntBASIC18.33■□□□□ 0.53
PCNX1Q96RV3 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.33■□□□□ 0.53
PCNX1Q96RV3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.33■□□□□ 0.53
PCNX1Q96RV3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 AC068473.5-201ENST00000616428 2072 ntBASIC18.33■□□□□ 0.52
PCNX1Q96RV3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCNX1Q96RV3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms