Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
TWNKQ96RR1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TWNKQ96RR1 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
TWNKQ96RR1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.11■■□□□ 1.13
TWNKQ96RR1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TWNKQ96RR1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC22.11■■□□□ 1.13
TWNKQ96RR1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TWNKQ96RR1 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC22.11■■□□□ 1.13
TWNKQ96RR1 CROCCP5-201ENST00000436658 830 ntBASIC22.11■■□□□ 1.13
TWNKQ96RR1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.11■■□□□ 1.13
TWNKQ96RR1 AC007322.4-201ENST00000509611 723 ntBASIC22.11■■□□□ 1.13
TWNKQ96RR1 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC22.11■■□□□ 1.13
TWNKQ96RR1 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
TWNKQ96RR1 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.11■■□□□ 1.13
TWNKQ96RR1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TWNKQ96RR1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
TWNKQ96RR1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 METTL26-203ENST00000397664 604 ntTSL 2 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 AC090192.1-201ENST00000517740 490 ntBASIC22.1■■□□□ 1.13
TWNKQ96RR1 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 AC068338.2-201ENST00000563278 1430 ntBASIC22.1■■□□□ 1.13
TWNKQ96RR1 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 AL050303.2-201ENST00000619798 666 ntBASIC22.1■■□□□ 1.13
TWNKQ96RR1 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 AC231657.2-201ENST00000624556 255 ntBASIC22.1■■□□□ 1.13
TWNKQ96RR1 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC22.1■■□□□ 1.13
TWNKQ96RR1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
TWNKQ96RR1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
TWNKQ96RR1 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TWNKQ96RR1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC22.09■■□□□ 1.13
TWNKQ96RR1 AC007322.1-201ENST00000426983 750 ntBASIC22.09■■□□□ 1.13
TWNKQ96RR1 APTR-203ENST00000430801 583 ntTSL 5 BASIC22.09■■□□□ 1.13
TWNKQ96RR1 AC026185.1-201ENST00000445748 174 ntBASIC22.09■■□□□ 1.13
TWNKQ96RR1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.09■■□□□ 1.13
TWNKQ96RR1 MDK-213ENST00000617138 635 ntTSL 2 BASIC22.09■■□□□ 1.13
TWNKQ96RR1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.09■■□□□ 1.13
TWNKQ96RR1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC22.09■■□□□ 1.13
TWNKQ96RR1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC22.09■■□□□ 1.13
TWNKQ96RR1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
TWNKQ96RR1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.09■■□□□ 1.13
TWNKQ96RR1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.09■■□□□ 1.13
TWNKQ96RR1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TWNKQ96RR1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
TWNKQ96RR1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
TWNKQ96RR1 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC22.08■■□□□ 1.13
TWNKQ96RR1 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
TWNKQ96RR1 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
TWNKQ96RR1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
TWNKQ96RR1 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC22.08■■□□□ 1.13
TWNKQ96RR1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC22.08■■□□□ 1.13
TWNKQ96RR1 AC016405.3-201ENST00000607710 860 ntBASIC22.08■■□□□ 1.13
TWNKQ96RR1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.08■■□□□ 1.13
TWNKQ96RR1 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TWNKQ96RR1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
TWNKQ96RR1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.08■■□□□ 1.12
TWNKQ96RR1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TWNKQ96RR1 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
TWNKQ96RR1 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
TWNKQ96RR1 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TWNKQ96RR1 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
TWNKQ96RR1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TWNKQ96RR1 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TWNKQ96RR1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TWNKQ96RR1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.07■■□□□ 1.12
TWNKQ96RR1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
TWNKQ96RR1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.07■■□□□ 1.12
TWNKQ96RR1 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TWNKQ96RR1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
TWNKQ96RR1 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TWNKQ96RR1 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TWNKQ96RR1 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.06■■□□□ 1.12
TWNKQ96RR1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC22.06■■□□□ 1.12
TWNKQ96RR1 MIR663A-201ENST00000385250 93 ntBASIC22.06■■□□□ 1.12
TWNKQ96RR1 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC22.06■■□□□ 1.12
TWNKQ96RR1 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
TWNKQ96RR1 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
TWNKQ96RR1 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.06■■□□□ 1.12
TWNKQ96RR1 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
TWNKQ96RR1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.06■■□□□ 1.12
TWNKQ96RR1 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
TWNKQ96RR1 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC22.06■■□□□ 1.12
TWNKQ96RR1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TWNKQ96RR1 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
TWNKQ96RR1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.05■■□□□ 1.12
TWNKQ96RR1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
TWNKQ96RR1 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.05■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms