Protein–RNA interactions for Protein: Q96IS3

RAX2, Retina and anterior neural fold homeobox protein 2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAX2Q96IS3 AC133552.2-202ENST00000575694 574 ntBASIC16.17■□□□□ 0.18
RAX2Q96IS3 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC16.17■□□□□ 0.18
RAX2Q96IS3 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.17■□□□□ 0.18
RAX2Q96IS3 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAX2Q96IS3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RAX2Q96IS3 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RAX2Q96IS3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAX2Q96IS3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAX2Q96IS3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RAX2Q96IS3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.17■□□□□ 0.18
RAX2Q96IS3 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAX2Q96IS3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAX2Q96IS3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAX2Q96IS3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 CYP2T1P-201ENST00000432607 1285 ntBASIC16.16■□□□□ 0.18
RAX2Q96IS3 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 AC142086.2-201ENST00000569753 217 ntBASIC16.16■□□□□ 0.18
RAX2Q96IS3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAX2Q96IS3 FGF8-207ENST00000618991 856 ntTSL 3 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC16.16■□□□□ 0.18
RAX2Q96IS3 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAX2Q96IS3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RAX2Q96IS3 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RAX2Q96IS3 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAX2Q96IS3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAX2Q96IS3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAX2Q96IS3 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAX2Q96IS3 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAX2Q96IS3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAX2Q96IS3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAX2Q96IS3 AC138932.1-201ENST00000534164 6830 ntBASIC16.15■□□□□ 0.18
RAX2Q96IS3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 PFKL-212ENST00000628044 129 ntTSL 3 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
RAX2Q96IS3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
RAX2Q96IS3 AL024507.2-201ENST00000606070 2574 ntBASIC16.15■□□□□ 0.18
RAX2Q96IS3 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC16.15■□□□□ 0.18
RAX2Q96IS3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
RAX2Q96IS3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 RBM17P2-201ENST00000616397 1405 ntBASIC16.14■□□□□ 0.17
RAX2Q96IS3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 AL138781.1-201ENST00000566567 1274 ntBASIC16.14■□□□□ 0.17
RAX2Q96IS3 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
RAX2Q96IS3 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
RAX2Q96IS3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAX2Q96IS3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAX2Q96IS3 AC242852.2-201ENST00000615738 1807 ntBASIC16.13■□□□□ 0.17
RAX2Q96IS3 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAX2Q96IS3 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAX2Q96IS3 APTR-205ENST00000447009 902 ntTSL 2 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.13■□□□□ 0.17
RAX2Q96IS3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms