Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 FEM1AP1-201ENST00000431297 1995 ntBASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PDLIM5Q96HC4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 KRT19P1-201ENST00000405746 1186 ntBASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PDLIM5Q96HC4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 AC097381.1-201ENST00000429019 1296 ntBASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 AC243732.1-201ENST00000612648 864 ntBASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 AC007225.1-201ENST00000566331 1836 ntBASIC20.3■□□□□ 0.84
PDLIM5Q96HC4 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 KRT18P61-201ENST00000585825 1298 ntBASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 MIR6821-201ENST00000617625 74 ntBASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 LINC01521-201ENST00000504184 1943 ntBASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PDLIM5Q96HC4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.28■□□□□ 0.84
PDLIM5Q96HC4 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms