Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 AC124016.1-201ENST00000609552 612 ntBASIC20.98■□□□□ 0.95
CLDN23Q96B33 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.98■□□□□ 0.95
CLDN23Q96B33 AC105020.6-201ENST00000621523 1217 ntBASIC20.98■□□□□ 0.95
CLDN23Q96B33 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CLDN23Q96B33 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.98■□□□□ 0.95
CLDN23Q96B33 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN23Q96B33 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN23Q96B33 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN23Q96B33 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN23Q96B33 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN23Q96B33 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN23Q96B33 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.97■□□□□ 0.95
CLDN23Q96B33 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
CLDN23Q96B33 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.97■□□□□ 0.95
CLDN23Q96B33 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN23Q96B33 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN23Q96B33 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN23Q96B33 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.97■□□□□ 0.95
CLDN23Q96B33 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN23Q96B33 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN23Q96B33 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CLDN23Q96B33 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 AL135905.2-201ENST00000584934 1404 ntBASIC20.96■□□□□ 0.95
CLDN23Q96B33 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN23Q96B33 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN23Q96B33 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN23Q96B33 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 AC097493.4-201ENST00000641197 219 ntBASIC20.96■□□□□ 0.95
CLDN23Q96B33 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN23Q96B33 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN23Q96B33 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN23Q96B33 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN23Q96B33 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
CLDN23Q96B33 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CLDN23Q96B33 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN23Q96B33 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN23Q96B33 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CLDN23Q96B33 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 MIR4785-201ENST00000585005 73 ntBASIC20.95■□□□□ 0.94
CLDN23Q96B33 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 AC012306.2-201ENST00000609350 630 ntBASIC20.95■□□□□ 0.94
CLDN23Q96B33 AC133561.5-201ENST00000635547 218 ntBASIC20.95■□□□□ 0.94
CLDN23Q96B33 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
CLDN23Q96B33 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CLDN23Q96B33 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN23Q96B33 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN23Q96B33 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN23Q96B33 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN23Q96B33 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CLDN23Q96B33 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CLDN23Q96B33 AC087499.1-201ENST00000418141 1075 ntBASIC20.94■□□□□ 0.94
CLDN23Q96B33 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.94■□□□□ 0.94
CLDN23Q96B33 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.94■□□□□ 0.94
CLDN23Q96B33 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN23Q96B33 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.94■□□□□ 0.94
CLDN23Q96B33 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN23Q96B33 C11orf96-202ENST00000528572 1834 ntBASIC20.94■□□□□ 0.94
CLDN23Q96B33 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CLDN23Q96B33 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN23Q96B33 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN23Q96B33 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN23Q96B33 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLDN23Q96B33 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CLDN23Q96B33 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN23Q96B33 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN23Q96B33 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN23Q96B33 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN23Q96B33 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN23Q96B33 C2orf69P4-201ENST00000565394 541 ntBASIC20.93■□□□□ 0.94
CLDN23Q96B33 AL023875.1-201ENST00000640777 796 ntBASIC20.93■□□□□ 0.94
CLDN23Q96B33 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN23Q96B33 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN23Q96B33 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.93■□□□□ 0.94
CLDN23Q96B33 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
CLDN23Q96B33 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLDN23Q96B33 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.93■□□□□ 0.94
CLDN23Q96B33 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN23Q96B33 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN23Q96B33 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN23Q96B33 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLDN23Q96B33 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.92■□□□□ 0.94
CLDN23Q96B33 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN23Q96B33 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLDN23Q96B33 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.92■□□□□ 0.94
CLDN23Q96B33 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms