Protein–RNA interactions for Protein: Q96AK3

APOBEC3D, DNA dC->dU-editing enzyme APOBEC-3D, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3DQ96AK3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.99■□□□□ 0.47
APOBEC3DQ96AK3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
APOBEC3DQ96AK3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 KRT18P5-201ENST00000436075 1291 ntBASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
APOBEC3DQ96AK3 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APOBEC3DQ96AK3 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
APOBEC3DQ96AK3 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 KRT18P11-201ENST00000435214 1283 ntBASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 UBE2DNL-204ENST00000602536 740 ntBASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 RARRES2P11-201ENST00000635158 484 ntBASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 AC121338.2-201ENST00000622535 1744 ntBASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APOBEC3DQ96AK3 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.94■□□□□ 0.46
APOBEC3DQ96AK3 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms