Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 EEF1DP3-203ENST00000566025 782 ntBASIC19.57■□□□□ 0.72
TM9SF4Q92544 MIR4758-201ENST00000577688 71 ntBASIC19.57■□□□□ 0.72
TM9SF4Q92544 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.57■□□□□ 0.72
TM9SF4Q92544 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.57■□□□□ 0.72
TM9SF4Q92544 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.57■□□□□ 0.72
TM9SF4Q92544 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.57■□□□□ 0.72
TM9SF4Q92544 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF4Q92544 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF4Q92544 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
TM9SF4Q92544 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
TM9SF4Q92544 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF4Q92544 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF4Q92544 FAM201B-201ENST00000458407 597 ntBASIC19.56■□□□□ 0.72
TM9SF4Q92544 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.56■□□□□ 0.72
TM9SF4Q92544 AC008175.2-201ENST00000612840 297 ntBASIC19.56■□□□□ 0.72
TM9SF4Q92544 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF4Q92544 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF4Q92544 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF4Q92544 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.56■□□□□ 0.72
TM9SF4Q92544 AP006587.3-201ENST00000525742 1516 ntBASIC19.56■□□□□ 0.72
TM9SF4Q92544 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TM9SF4Q92544 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 TSPY20P-201ENST00000450910 630 ntBASIC19.55■□□□□ 0.72
TM9SF4Q92544 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TM9SF4Q92544 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.55■□□□□ 0.72
TM9SF4Q92544 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 AC073130.3-201ENST00000624389 2278 ntBASIC19.54■□□□□ 0.72
TM9SF4Q92544 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.54■□□□□ 0.72
TM9SF4Q92544 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 AC007322.4-201ENST00000509611 723 ntBASIC19.54■□□□□ 0.72
TM9SF4Q92544 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TM9SF4Q92544 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.54■□□□□ 0.72
TM9SF4Q92544 AC069236.1-201ENST00000604339 616 ntBASIC19.54■□□□□ 0.72
TM9SF4Q92544 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC19.54■□□□□ 0.72
TM9SF4Q92544 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TM9SF4Q92544 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TM9SF4Q92544 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TM9SF4Q92544 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
TM9SF4Q92544 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 KLF13-207ENST00000560473 489 ntTSL 3 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.53■□□□□ 0.72
TM9SF4Q92544 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TM9SF4Q92544 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TM9SF4Q92544 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.52■□□□□ 0.72
TM9SF4Q92544 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms