Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SVIPQ8NHG7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 AC018892.3-201ENST00000623986 2499 ntBASIC13.18□□□□□ -0.3
SVIPQ8NHG7 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SVIPQ8NHG7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 FER1L4-210ENST00000615531 5998 ntBASIC13.17□□□□□ -0.3
SVIPQ8NHG7 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 AC135776.1-201ENST00000319817 2481 ntBASIC13.17□□□□□ -0.3
SVIPQ8NHG7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC13.17□□□□□ -0.3
SVIPQ8NHG7 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 LINC00554-201ENST00000564841 3011 ntBASIC13.16□□□□□ -0.3
SVIPQ8NHG7 AL157384.1-201ENST00000445995 2473 ntBASIC13.16□□□□□ -0.3
SVIPQ8NHG7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC13.16□□□□□ -0.3
SVIPQ8NHG7 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SVIPQ8NHG7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms