Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTL9Q8NET4 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.73■■□□□ 1.71
RTL9Q8NET4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTL9Q8NET4 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.73■■□□□ 1.71
RTL9Q8NET4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC25.73■■□□□ 1.71
RTL9Q8NET4 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
RTL9Q8NET4 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL9Q8NET4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL9Q8NET4 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL9Q8NET4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.72■■□□□ 1.71
RTL9Q8NET4 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC25.72■■□□□ 1.71
RTL9Q8NET4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.72■■□□□ 1.71
RTL9Q8NET4 AL589743.5-201ENST00000616611 1050 ntBASIC25.72■■□□□ 1.71
RTL9Q8NET4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL9Q8NET4 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.72■■□□□ 1.71
RTL9Q8NET4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL9Q8NET4 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL9Q8NET4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.72■■□□□ 1.71
RTL9Q8NET4 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC25.72■■□□□ 1.71
RTL9Q8NET4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.72■■□□□ 1.71
RTL9Q8NET4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
RTL9Q8NET4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.72■■□□□ 1.71
RTL9Q8NET4 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.72■■□□□ 1.71
RTL9Q8NET4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTL9Q8NET4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
RTL9Q8NET4 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTL9Q8NET4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTL9Q8NET4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC25.71■■□□□ 1.71
RTL9Q8NET4 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC25.71■■□□□ 1.71
RTL9Q8NET4 UNC93B5-201ENST00000530315 699 ntBASIC25.71■■□□□ 1.71
RTL9Q8NET4 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTL9Q8NET4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC25.71■■□□□ 1.71
RTL9Q8NET4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC25.71■■□□□ 1.71
RTL9Q8NET4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTL9Q8NET4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
RTL9Q8NET4 AC233723.2-201ENST00000623798 2106 ntBASIC25.71■■□□□ 1.71
RTL9Q8NET4 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
RTL9Q8NET4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.71■■□□□ 1.71
RTL9Q8NET4 CYP21A1P-202ENST00000354927 1481 ntBASIC25.71■■□□□ 1.71
RTL9Q8NET4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RTL9Q8NET4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.71
RTL9Q8NET4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
RTL9Q8NET4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC25.7■■□□□ 1.71
RTL9Q8NET4 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.7■■□□□ 1.71
RTL9Q8NET4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.71
RTL9Q8NET4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
RTL9Q8NET4 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC25.7■■□□□ 1.7
RTL9Q8NET4 GCK-205ENST00000437084 1385 ntTSL 5 BASIC25.7■■□□□ 1.7
RTL9Q8NET4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC25.7■■□□□ 1.7
RTL9Q8NET4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
RTL9Q8NET4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC25.7■■□□□ 1.7
RTL9Q8NET4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
RTL9Q8NET4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC25.69■■□□□ 1.7
RTL9Q8NET4 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
RTL9Q8NET4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
RTL9Q8NET4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.69■■□□□ 1.7
RTL9Q8NET4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
RTL9Q8NET4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.69■■□□□ 1.7
RTL9Q8NET4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
RTL9Q8NET4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC25.68■■□□□ 1.7
RTL9Q8NET4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTL9Q8NET4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTL9Q8NET4 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
RTL9Q8NET4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.68■■□□□ 1.7
RTL9Q8NET4 MMAB-206ENST00000540016 945 ntTSL 3 BASIC25.68■■□□□ 1.7
RTL9Q8NET4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
RTL9Q8NET4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC25.68■■□□□ 1.7
RTL9Q8NET4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTL9Q8NET4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
RTL9Q8NET4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTL9Q8NET4 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTL9Q8NET4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTL9Q8NET4 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC25.67■■□□□ 1.7
RTL9Q8NET4 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTL9Q8NET4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC25.67■■□□□ 1.7
RTL9Q8NET4 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
RTL9Q8NET4 KRT18P68-201ENST00000392293 1000 ntBASIC25.67■■□□□ 1.7
RTL9Q8NET4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC25.67■■□□□ 1.7
RTL9Q8NET4 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
RTL9Q8NET4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC25.67■■□□□ 1.7
RTL9Q8NET4 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC25.67■■□□□ 1.7
RTL9Q8NET4 AC060766.5-201ENST00000590539 871 ntBASIC25.67■■□□□ 1.7
RTL9Q8NET4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC25.67■■□□□ 1.7
RTL9Q8NET4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
RTL9Q8NET4 AC006058.3-201ENST00000606217 1069 ntBASIC25.67■■□□□ 1.7
RTL9Q8NET4 HLA-B-256ENST00000639848 1089 ntBASIC25.67■■□□□ 1.7
RTL9Q8NET4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
RTL9Q8NET4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms