Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 PFKL-212ENST00000628044 129 ntTSL 3 BASIC21.27■■□□□ 1
KDM1BQ8NB78 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
KDM1BQ8NB78 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.27■■□□□ 1
KDM1BQ8NB78 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
KDM1BQ8NB78 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
KDM1BQ8NB78 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
KDM1BQ8NB78 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
KDM1BQ8NB78 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 PBX1-209ENST00000485769 834 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
KDM1BQ8NB78 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
KDM1BQ8NB78 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 STX5-203ENST00000394690 1568 ntTSL 5 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 AC245052.3-201ENST00000450182 901 ntBASIC21.23■□□□□ 0.99
KDM1BQ8NB78 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 RGMA-211ENST00000557420 989 ntTSL 3 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 AC133041.1-202ENST00000642053 222 ntBASIC21.23■□□□□ 0.99
KDM1BQ8NB78 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
KDM1BQ8NB78 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
KDM1BQ8NB78 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.21■□□□□ 0.99
KDM1BQ8NB78 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
KDM1BQ8NB78 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KDM1BQ8NB78 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
KDM1BQ8NB78 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
KDM1BQ8NB78 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.21■□□□□ 0.99
KDM1BQ8NB78 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.21■□□□□ 0.99
KDM1BQ8NB78 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms