Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 AL139246.5-201ENST00000606645 996 ntBASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.91■□□□□ 0.62
CLDN22Q8N7P3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 AC091305.1-201ENST00000479476 895 ntBASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 SUDS3P1-201ENST00000505831 966 ntBASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CLDN22Q8N7P3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.89■□□□□ 0.62
CLDN22Q8N7P3 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
CLDN22Q8N7P3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 AC073314.1-201ENST00000568729 2216 ntBASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CLDN22Q8N7P3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CLDN22Q8N7P3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 AC005224.4-201ENST00000583262 1652 ntBASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
CLDN22Q8N7P3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms