Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 AC097658.1-201ENST00000475555 843 ntBASIC22.5■■□□□ 1.19
VPS52Q8N1B4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 DET1-205ENST00000558413 583 ntTSL 4 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 AL162412.1-201ENST00000567129 965 ntBASIC22.5■■□□□ 1.19
VPS52Q8N1B4 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 AC083880.1-201ENST00000608266 535 ntBASIC22.5■■□□□ 1.19
VPS52Q8N1B4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
VPS52Q8N1B4 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 AC080038.3-201ENST00000623346 1952 ntBASIC22.49■■□□□ 1.19
VPS52Q8N1B4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.49■■□□□ 1.19
VPS52Q8N1B4 AC061975.6-201ENST00000579045 1553 ntBASIC22.49■■□□□ 1.19
VPS52Q8N1B4 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 AC093827.2-201ENST00000512654 315 ntBASIC22.48■■□□□ 1.19
VPS52Q8N1B4 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 MYC-209ENST00000641252 345 ntBASIC22.48■■□□□ 1.19
VPS52Q8N1B4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.48■■□□□ 1.19
VPS52Q8N1B4 AC010980.2-201ENST00000587099 1412 ntBASIC22.48■■□□□ 1.19
VPS52Q8N1B4 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 PRORSD1P-201ENST00000295112 541 ntBASIC22.47■■□□□ 1.19
VPS52Q8N1B4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 RARRES2P4-201ENST00000514074 484 ntBASIC22.47■■□□□ 1.19
VPS52Q8N1B4 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 AC243732.1-201ENST00000612648 864 ntBASIC22.47■■□□□ 1.19
VPS52Q8N1B4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
VPS52Q8N1B4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 AC092053.2-201ENST00000640557 1818 ntBASIC22.46■■□□□ 1.19
VPS52Q8N1B4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.46■■□□□ 1.19
VPS52Q8N1B4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC22.45■■□□□ 1.19
VPS52Q8N1B4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
VPS52Q8N1B4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms