Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 AC006128.1-201ENST00000624704 1661 ntBASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LINC00346Q8IVM7 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LINC00346Q8IVM7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 AC121338.2-201ENST00000622535 1744 ntBASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 KRT87P-202ENST00000534226 1464 ntBASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 AC027612.3-201ENST00000413684 1047 ntBASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LINC00346Q8IVM7 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 LINC01006-201ENST00000333319 2292 ntBASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.34■□□□□ 0.53
LINC00346Q8IVM7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00346Q8IVM7 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00346Q8IVM7 AP004607.4-201ENST00000530158 1459 ntBASIC18.33■□□□□ 0.53
LINC00346Q8IVM7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00346Q8IVM7 AC073130.3-201ENST00000624389 2278 ntBASIC18.33■□□□□ 0.53
LINC00346Q8IVM7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00346Q8IVM7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
LINC00346Q8IVM7 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
LINC00346Q8IVM7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 FEM1AP1-201ENST00000431297 1995 ntBASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC18.32■□□□□ 0.52
LINC00346Q8IVM7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms