Protein–RNA interactions for Protein: Q86VQ0

LCA5, Lebercilin, humanhuman

Predictions only

Length 697 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5Q86VQ0 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LCA5Q86VQ0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 AL136116.3-201ENST00000402907 1138 ntBASIC20.66■□□□□ 0.9
LCA5Q86VQ0 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
LCA5Q86VQ0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 AC005224.4-201ENST00000583262 1652 ntBASIC20.65■□□□□ 0.9
LCA5Q86VQ0 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 UNC93B3-201ENST00000308076 687 ntBASIC20.65■□□□□ 0.9
LCA5Q86VQ0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
LCA5Q86VQ0 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
LCA5Q86VQ0 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.64■□□□□ 0.9
LCA5Q86VQ0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LCA5Q86VQ0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LCA5Q86VQ0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LCA5Q86VQ0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.64■□□□□ 0.9
LCA5Q86VQ0 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
LCA5Q86VQ0 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20.64■□□□□ 0.9
LCA5Q86VQ0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LCA5Q86VQ0 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LCA5Q86VQ0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
LCA5Q86VQ0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.62■□□□□ 0.89
LCA5Q86VQ0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LCA5Q86VQ0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms