Protein–RNA interactions for Protein: Q6ZUF6

LINC00336, Putative uncharacterized protein encoded by LINC00336, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336Q6ZUF6 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 Z99916.2-201ENST00000604037 246 ntBASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LINC00336Q6ZUF6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 AC012618.2-201ENST00000428058 849 ntBASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 CDV3P1-201ENST00000471403 739 ntBASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 PNMA6B-201ENST00000538162 1200 ntBASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 LINC01960-201ENST00000563759 1884 ntBASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 FAM21FP-204ENST00000608637 956 ntBASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
LINC00336Q6ZUF6 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 KRT18P21-201ENST00000515767 1272 ntBASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 BX088651.1-201ENST00000540551 451 ntBASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LINC00336Q6ZUF6 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 MDFI-202ENST00000373050 809 ntTSL 2 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 HES2-205ENST00000487437 968 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LINC00336Q6ZUF6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms