Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 MIR4785-201ENST00000585005 73 ntBASIC16.19■□□□□ 0.18
SHISA2Q6UWI4 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA2Q6UWI4 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA2Q6UWI4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
SHISA2Q6UWI4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA2Q6UWI4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SHISA2Q6UWI4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA2Q6UWI4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SHISA2Q6UWI4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 AC061975.6-201ENST00000579045 1553 ntBASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 KRT18P68-201ENST00000392293 1000 ntBASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 AC245052.3-201ENST00000450182 901 ntBASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 AC233263.1-201ENST00000578059 224 ntBASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.18■□□□□ 0.18
SHISA2Q6UWI4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
SHISA2Q6UWI4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 AC091799.1-201ENST00000422823 811 ntBASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 TSPY7P-201ENST00000431358 1114 ntBASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 ABCB10P4-201ENST00000566803 2184 ntBASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA2Q6UWI4 PREB-202ENST00000406567 1910 ntTSL 5 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 AL049637.2-201ENST00000641778 930 ntBASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA2Q6UWI4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.18
SHISA2Q6UWI4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA2Q6UWI4 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SHISA2Q6UWI4 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.14■□□□□ 0.17
SHISA2Q6UWI4 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC16.14■□□□□ 0.17
SHISA2Q6UWI4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA2Q6UWI4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA2Q6UWI4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA2Q6UWI4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms