Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 REXO1L12P-201ENST00000622156 912 ntBASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 AC026471.6-201ENST00000622954 1905 ntBASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR3Q6P9H4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR3Q6P9H4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 AC211429.1-201ENST00000415277 523 ntBASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 AC068473.5-201ENST00000616428 2072 ntBASIC22.53■■□□□ 1.2
CNKSR3Q6P9H4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 KLF2-202ENST00000592003 564 ntTSL 3 BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 AC010542.4-201ENST00000563151 1910 ntBASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.52■■□□□ 1.2
CNKSR3Q6P9H4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.52■■□□□ 1.19
CNKSR3Q6P9H4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
CNKSR3Q6P9H4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 AC012618.2-201ENST00000428058 849 ntBASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 FAM210CP-201ENST00000445714 574 ntBASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
CNKSR3Q6P9H4 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.5■■□□□ 1.19
CNKSR3Q6P9H4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
CNKSR3Q6P9H4 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms