Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RNF220Q5VTB9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RNF220Q5VTB9 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.92■□□□□ 0.78
RNF220Q5VTB9 GABARAPL3-202ENST00000624044 1851 ntBASIC19.92■□□□□ 0.78
RNF220Q5VTB9 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 AC010525.1-201ENST00000585559 441 ntBASIC19.91■□□□□ 0.78
RNF220Q5VTB9 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.91■□□□□ 0.78
RNF220Q5VTB9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 BX323043.1-201ENST00000641006 1765 ntBASIC19.9■□□□□ 0.78
RNF220Q5VTB9 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 AC010141.3-201ENST00000456659 717 ntBASIC19.9■□□□□ 0.78
RNF220Q5VTB9 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
RNF220Q5VTB9 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
RNF220Q5VTB9 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms