Protein–RNA interactions for Protein: Q5TH69

ARFGEF3, Brefeldin A-inhibited guanine nucleotide-exchange protein 3, humanhuman

Predictions only

Length 2,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF3Q5TH69 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARFGEF3Q5TH69 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
ARFGEF3Q5TH69 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARFGEF3Q5TH69 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.69■□□□□ 0.42
ARFGEF3Q5TH69 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARFGEF3Q5TH69 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC17.69■□□□□ 0.42
ARFGEF3Q5TH69 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.69■□□□□ 0.42
ARFGEF3Q5TH69 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
ARFGEF3Q5TH69 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
ARFGEF3Q5TH69 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ARFGEF3Q5TH69 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 AC092118.2-201ENST00000613495 667 ntBASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 AC066615.1-201ENST00000640911 628 ntBASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC17.66■□□□□ 0.42
ARFGEF3Q5TH69 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 KRT17P1-201ENST00000399211 1546 ntBASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 MIPEPP3-201ENST00000412105 444 ntBASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ARFGEF3Q5TH69 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ARFGEF3Q5TH69 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.42
ARFGEF3Q5TH69 UNC93B5-201ENST00000530315 699 ntBASIC17.64■□□□□ 0.42
ARFGEF3Q5TH69 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC17.64■□□□□ 0.42
ARFGEF3Q5TH69 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ARFGEF3Q5TH69 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.64■□□□□ 0.42
ARFGEF3Q5TH69 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
ARFGEF3Q5TH69 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ARFGEF3Q5TH69 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms