Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 AC011767.1-201ENST00000617410 1153 ntBASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LDLRAP1Q5SW96 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 AC245052.3-201ENST00000450182 901 ntBASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.67■□□□□ 0.9
LDLRAP1Q5SW96 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 AC010536.3-201ENST00000620306 533 ntBASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LDLRAP1Q5SW96 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 AC243732.1-201ENST00000612648 864 ntBASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LDLRAP1Q5SW96 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LDLRAP1Q5SW96 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LDLRAP1Q5SW96 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LDLRAP1Q5SW96 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LDLRAP1Q5SW96 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.9
LDLRAP1Q5SW96 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
LDLRAP1Q5SW96 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 RBM17P2-201ENST00000616397 1405 ntBASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 TERF1P5-201ENST00000477545 1207 ntBASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 AC080038.1-201ENST00000611274 1154 ntBASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LDLRAP1Q5SW96 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LDLRAP1Q5SW96 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms