Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRK2Q5S007 AC004812.2-201ENST00000611079 2094 ntBASIC18.29■□□□□ 0.52
LRRK2Q5S007 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRRK2Q5S007 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRK2Q5S007 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRRK2Q5S007 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LRRK2Q5S007 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.29■□□□□ 0.52
LRRK2Q5S007 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRK2Q5S007 AC091076.1-201ENST00000610741 619 ntBASIC18.29■□□□□ 0.52
LRRK2Q5S007 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.29■□□□□ 0.52
LRRK2Q5S007 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRK2Q5S007 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRK2Q5S007 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRRK2Q5S007 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 LINC00526-201ENST00000581067 1875 ntBASIC18.28■□□□□ 0.52
LRRK2Q5S007 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 AC120498.8-201ENST00000614275 531 ntBASIC18.28■□□□□ 0.52
LRRK2Q5S007 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
LRRK2Q5S007 AC138932.3-201ENST00000567634 1902 ntBASIC18.28■□□□□ 0.52
LRRK2Q5S007 ABCB10P4-201ENST00000566803 2184 ntBASIC18.28■□□□□ 0.52
LRRK2Q5S007 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.27■□□□□ 0.52
LRRK2Q5S007 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRK2Q5S007 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.27■□□□□ 0.52
LRRK2Q5S007 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRK2Q5S007 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
LRRK2Q5S007 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
LRRK2Q5S007 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRK2Q5S007 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
LRRK2Q5S007 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRK2Q5S007 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
LRRK2Q5S007 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
LRRK2Q5S007 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRK2Q5S007 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
LRRK2Q5S007 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.27■□□□□ 0.52
LRRK2Q5S007 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRRK2Q5S007 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.51
LRRK2Q5S007 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
LRRK2Q5S007 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
LRRK2Q5S007 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.27■□□□□ 0.51
LRRK2Q5S007 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.27■□□□□ 0.51
LRRK2Q5S007 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
LRRK2Q5S007 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRK2Q5S007 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRK2Q5S007 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRK2Q5S007 AC005521.1-201ENST00000393351 872 ntBASIC18.26■□□□□ 0.51
LRRK2Q5S007 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRK2Q5S007 CRYGFP-201ENST00000418459 633 ntBASIC18.26■□□□□ 0.51
LRRK2Q5S007 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRK2Q5S007 AL139125.2-201ENST00000623134 1869 ntBASIC18.26■□□□□ 0.51
LRRK2Q5S007 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRK2Q5S007 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRK2Q5S007 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.26■□□□□ 0.51
LRRK2Q5S007 ISCU-203ENST00000431221 799 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRK2Q5S007 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRK2Q5S007 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRK2Q5S007 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.26■□□□□ 0.51
LRRK2Q5S007 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
LRRK2Q5S007 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
LRRK2Q5S007 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRK2Q5S007 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRK2Q5S007 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.25■□□□□ 0.51
LRRK2Q5S007 EED-207ENST00000528180 1745 ntTSL 5 BASIC18.25■□□□□ 0.51
LRRK2Q5S007 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
LRRK2Q5S007 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRK2Q5S007 DUX4L26-201ENST00000489078 1255 ntBASIC18.25■□□□□ 0.51
LRRK2Q5S007 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
LRRK2Q5S007 KRT18P56-201ENST00000507275 550 ntBASIC18.25■□□□□ 0.51
LRRK2Q5S007 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
LRRK2Q5S007 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
LRRK2Q5S007 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRK2Q5S007 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRK2Q5S007 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRK2Q5S007 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRK2Q5S007 AF186192.3-201ENST00000583427 947 ntBASIC18.24■□□□□ 0.51
LRRK2Q5S007 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.24■□□□□ 0.51
LRRK2Q5S007 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRK2Q5S007 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRK2Q5S007 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRK2Q5S007 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRK2Q5S007 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
LRRK2Q5S007 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRK2Q5S007 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC18.24■□□□□ 0.51
LRRK2Q5S007 AC061975.6-201ENST00000579045 1553 ntBASIC18.24■□□□□ 0.51
LRRK2Q5S007 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRK2Q5S007 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
LRRK2Q5S007 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
LRRK2Q5S007 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.23■□□□□ 0.51
LRRK2Q5S007 AC087388.1-201ENST00000571370 1112 ntBASIC18.23■□□□□ 0.51
LRRK2Q5S007 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms