Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 KRT18P29-201ENST00000397031 1267 ntBASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 ESRRAP1-201ENST00000400596 1257 ntBASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RNFT1Q5M7Z0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNFT1Q5M7Z0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNFT1Q5M7Z0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNFT1Q5M7Z0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.77■□□□□ 0.6
RNFT1Q5M7Z0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.77■□□□□ 0.6
RNFT1Q5M7Z0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.77■□□□□ 0.6
RNFT1Q5M7Z0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RNFT1Q5M7Z0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNFT1Q5M7Z0 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RNFT1Q5M7Z0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNFT1Q5M7Z0 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.77■□□□□ 0.59
RNFT1Q5M7Z0 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNFT1Q5M7Z0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RNFT1Q5M7Z0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 AC007322.3-201ENST00000426526 701 ntBASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.76■□□□□ 0.59
RNFT1Q5M7Z0 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 MCRIP2P1-201ENST00000394346 511 ntBASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RNFT1Q5M7Z0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RNFT1Q5M7Z0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms