Protein–RNA interactions for Protein: Q07837

SLC3A1, Neutral and basic amino acid transport protein rBAT, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1Q07837 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SLC3A1Q07837 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SLC3A1Q07837 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
SLC3A1Q07837 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SLC3A1Q07837 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC3A1Q07837 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.61■□□□□ 0.57
SLC3A1Q07837 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC3A1Q07837 SLC47A1P1-202ENST00000449666 945 ntBASIC18.61■□□□□ 0.57
SLC3A1Q07837 AL034346.1-201ENST00000568244 1277 ntBASIC18.61■□□□□ 0.57
SLC3A1Q07837 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SLC3A1Q07837 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.61■□□□□ 0.57
SLC3A1Q07837 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.61■□□□□ 0.57
SLC3A1Q07837 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SLC3A1Q07837 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC3A1Q07837 PCDHAC2-203ENST00000615316 3011 ntBASIC18.6■□□□□ 0.57
SLC3A1Q07837 AP004607.7-201ENST00000527152 1677 ntBASIC18.6■□□□□ 0.57
SLC3A1Q07837 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC3A1Q07837 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC3A1Q07837 AL391422.3-201ENST00000603791 2761 ntBASIC18.59■□□□□ 0.57
SLC3A1Q07837 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC3A1Q07837 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC3A1Q07837 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC3A1Q07837 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC3A1Q07837 MIR935-201ENST00000401179 91 ntBASIC18.59■□□□□ 0.57
SLC3A1Q07837 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC3A1Q07837 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SLC3A1Q07837 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC3A1Q07837 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC3A1Q07837 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC3A1Q07837 AC006128.1-201ENST00000624704 1661 ntBASIC18.59■□□□□ 0.57
SLC3A1Q07837 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC3A1Q07837 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC3A1Q07837 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC3A1Q07837 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC3A1Q07837 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC3A1Q07837 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC3A1Q07837 GABARAPL3-202ENST00000624044 1851 ntBASIC18.58■□□□□ 0.57
SLC3A1Q07837 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.58■□□□□ 0.57
SLC3A1Q07837 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
SLC3A1Q07837 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC3A1Q07837 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC3A1Q07837 IRS3P-201ENST00000223076 1006 ntBASIC18.58■□□□□ 0.56
SLC3A1Q07837 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SLC3A1Q07837 ZNRF2P3-201ENST00000424200 374 ntBASIC18.58■□□□□ 0.56
SLC3A1Q07837 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SLC3A1Q07837 AP005435.1-201ENST00000529293 1178 ntBASIC18.58■□□□□ 0.56
SLC3A1Q07837 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC3A1Q07837 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC3A1Q07837 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SLC3A1Q07837 AC073314.1-201ENST00000568729 2216 ntBASIC18.58■□□□□ 0.56
SLC3A1Q07837 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC3A1Q07837 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC3A1Q07837 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC3A1Q07837 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC3A1Q07837 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC3A1Q07837 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC3A1Q07837 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC3A1Q07837 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC3A1Q07837 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC3A1Q07837 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC3A1Q07837 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms