Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.75■□□□□ 0.75
SKP1P63208 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SKP1P63208 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SKP1P63208 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SKP1P63208 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SKP1P63208 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SKP1P63208 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SKP1P63208 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.75■□□□□ 0.75
SKP1P63208 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC19.75■□□□□ 0.75
SKP1P63208 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SKP1P63208 AC007322.4-201ENST00000509611 723 ntBASIC19.75■□□□□ 0.75
SKP1P63208 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.75■□□□□ 0.75
SKP1P63208 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.75■□□□□ 0.75
SKP1P63208 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SKP1P63208 RBM17P2-201ENST00000616397 1405 ntBASIC19.75■□□□□ 0.75
SKP1P63208 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SKP1P63208 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.75■□□□□ 0.75
SKP1P63208 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.75■□□□□ 0.75
SKP1P63208 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
SKP1P63208 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.74■□□□□ 0.75
SKP1P63208 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SKP1P63208 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SKP1P63208 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SKP1P63208 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.74■□□□□ 0.75
SKP1P63208 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.74■□□□□ 0.75
SKP1P63208 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.74■□□□□ 0.75
SKP1P63208 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.74■□□□□ 0.75
SKP1P63208 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.74■□□□□ 0.75
SKP1P63208 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SKP1P63208 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.74■□□□□ 0.75
SKP1P63208 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SKP1P63208 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SKP1P63208 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SKP1P63208 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.74■□□□□ 0.75
SKP1P63208 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SKP1P63208 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.73■□□□□ 0.75
SKP1P63208 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SKP1P63208 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SKP1P63208 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SKP1P63208 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SKP1P63208 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SKP1P63208 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.73■□□□□ 0.75
SKP1P63208 AC007322.1-201ENST00000426983 750 ntBASIC19.73■□□□□ 0.75
SKP1P63208 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.73■□□□□ 0.75
SKP1P63208 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC19.73■□□□□ 0.75
SKP1P63208 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
SKP1P63208 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SKP1P63208 CLDN5-201ENST00000403084 2357 ntBASIC19.73■□□□□ 0.75
SKP1P63208 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SKP1P63208 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.73■□□□□ 0.75
SKP1P63208 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SKP1P63208 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.72■□□□□ 0.75
SKP1P63208 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SKP1P63208 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.72■□□□□ 0.75
SKP1P63208 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.72■□□□□ 0.75
SKP1P63208 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SKP1P63208 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SKP1P63208 AL162412.1-201ENST00000567129 965 ntBASIC19.72■□□□□ 0.75
SKP1P63208 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SKP1P63208 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SKP1P63208 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.71■□□□□ 0.75
SKP1P63208 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SKP1P63208 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 CDV3P1-201ENST00000471403 739 ntBASIC19.71■□□□□ 0.75
SKP1P63208 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.71■□□□□ 0.75
SKP1P63208 DUX4L16-201ENST00000555130 1264 ntBASIC19.71■□□□□ 0.75
SKP1P63208 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.71■□□□□ 0.75
SKP1P63208 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.71■□□□□ 0.75
SKP1P63208 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
SKP1P63208 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
SKP1P63208 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC19.71■□□□□ 0.75
SKP1P63208 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SKP1P63208 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SKP1P63208 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SKP1P63208 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SKP1P63208 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC19.7■□□□□ 0.74
SKP1P63208 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SKP1P63208 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SKP1P63208 AC026185.1-201ENST00000445748 174 ntBASIC19.7■□□□□ 0.74
SKP1P63208 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.7■□□□□ 0.74
SKP1P63208 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SKP1P63208 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SKP1P63208 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.7■□□□□ 0.74
SKP1P63208 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.7■□□□□ 0.74
SKP1P63208 AL591742.1-201ENST00000604433 565 ntBASIC19.7■□□□□ 0.74
SKP1P63208 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.7■□□□□ 0.74
SKP1P63208 AC073111.5-205ENST00000641717 521 ntBASIC19.7■□□□□ 0.74
SKP1P63208 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SKP1P63208 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SKP1P63208 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC19.69■□□□□ 0.74
SKP1P63208 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms