Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
LSM3P62310 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM3P62310 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LSM3P62310 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
LSM3P62310 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
LSM3P62310 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
LSM3P62310 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LSM3P62310 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM3P62310 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM3P62310 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM3P62310 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LSM3P62310 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
LSM3P62310 USP45-205ENST00000472914 1617 ntTSL 5 BASIC18.72■□□□□ 0.59
LSM3P62310 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.72■□□□□ 0.59
LSM3P62310 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
LSM3P62310 AC139795.1-202ENST00000500444 432 ntBASIC18.72■□□□□ 0.59
LSM3P62310 AC129492.7-201ENST00000622992 756 ntBASIC18.72■□□□□ 0.59
LSM3P62310 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM3P62310 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM3P62310 AC004408.2-201ENST00000623613 2777 ntBASIC18.72■□□□□ 0.59
LSM3P62310 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM3P62310 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM3P62310 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LSM3P62310 AC005703.6-201ENST00000623265 1329 ntBASIC18.72■□□□□ 0.59
LSM3P62310 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.72■□□□□ 0.59
LSM3P62310 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 AC099778.1-201ENST00000568593 1911 ntBASIC18.71■□□□□ 0.59
LSM3P62310 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 MIR7108-201ENST00000614319 87 ntBASIC18.71■□□□□ 0.59
LSM3P62310 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC18.71■□□□□ 0.59
LSM3P62310 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.71■□□□□ 0.59
LSM3P62310 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LSM3P62310 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.58
LSM3P62310 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
LSM3P62310 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 AP000974.1-201ENST00000623909 2387 ntBASIC18.7■□□□□ 0.58
LSM3P62310 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.7■□□□□ 0.58
LSM3P62310 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 BX323043.1-201ENST00000641006 1765 ntBASIC18.7■□□□□ 0.58
LSM3P62310 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
LSM3P62310 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.7■□□□□ 0.58
LSM3P62310 AC020763.4-201ENST00000623414 4170 ntBASIC18.7■□□□□ 0.58
LSM3P62310 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
LSM3P62310 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM3P62310 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.69■□□□□ 0.58
LSM3P62310 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC18.69■□□□□ 0.58
LSM3P62310 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC18.69■□□□□ 0.58
LSM3P62310 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.69■□□□□ 0.58
LSM3P62310 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM3P62310 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM3P62310 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM3P62310 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM3P62310 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LSM3P62310 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LSM3P62310 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LSM3P62310 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
LSM3P62310 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 AC026471.1-201ENST00000564629 3026 ntBASIC18.68■□□□□ 0.58
LSM3P62310 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
LSM3P62310 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.68■□□□□ 0.58
LSM3P62310 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.68■□□□□ 0.58
LSM3P62310 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.68■□□□□ 0.58
LSM3P62310 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 AC120498.9-201ENST00000339021 3867 ntBASIC18.68■□□□□ 0.58
LSM3P62310 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LSM3P62310 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.68■□□□□ 0.58
LSM3P62310 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms