Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.09■□□□□ 0.49
SEC61A1P61619 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SEC61A1P61619 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.09■□□□□ 0.49
SEC61A1P61619 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
SEC61A1P61619 AC123595.1-201ENST00000440769 1046 ntBASIC18.09■□□□□ 0.49
SEC61A1P61619 AC034268.1-201ENST00000441047 882 ntBASIC18.09■□□□□ 0.49
SEC61A1P61619 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.09■□□□□ 0.49
SEC61A1P61619 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.09■□□□□ 0.49
SEC61A1P61619 AC104564.3-201ENST00000582367 638 ntBASIC18.09■□□□□ 0.49
SEC61A1P61619 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SEC61A1P61619 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SEC61A1P61619 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SEC61A1P61619 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SEC61A1P61619 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
SEC61A1P61619 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SEC61A1P61619 OXCT2P1-201ENST00000447263 1535 ntBASIC18.08■□□□□ 0.49
SEC61A1P61619 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SEC61A1P61619 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
SEC61A1P61619 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.08■□□□□ 0.49
SEC61A1P61619 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
SEC61A1P61619 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SEC61A1P61619 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEC61A1P61619 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SEC61A1P61619 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SEC61A1P61619 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.08■□□□□ 0.48
SEC61A1P61619 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.08■□□□□ 0.48
SEC61A1P61619 SMUG1P1-201ENST00000590640 811 ntBASIC18.08■□□□□ 0.48
SEC61A1P61619 Z98882.1-201ENST00000622160 2253 ntBASIC18.08■□□□□ 0.48
SEC61A1P61619 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SEC61A1P61619 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEC61A1P61619 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SEC61A1P61619 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SEC61A1P61619 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC18.08■□□□□ 0.48
SEC61A1P61619 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.07■□□□□ 0.48
SEC61A1P61619 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.07■□□□□ 0.48
SEC61A1P61619 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.07■□□□□ 0.48
SEC61A1P61619 PARL-206ENST00000435888 1098 ntTSL 5 BASIC18.07■□□□□ 0.48
SEC61A1P61619 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.07■□□□□ 0.48
SEC61A1P61619 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.07■□□□□ 0.48
SEC61A1P61619 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
SEC61A1P61619 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.07■□□□□ 0.48
SEC61A1P61619 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.07■□□□□ 0.48
SEC61A1P61619 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
SEC61A1P61619 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
SEC61A1P61619 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.07■□□□□ 0.48
SEC61A1P61619 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
SEC61A1P61619 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SEC61A1P61619 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.06■□□□□ 0.48
SEC61A1P61619 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SEC61A1P61619 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.06■□□□□ 0.48
SEC61A1P61619 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
SEC61A1P61619 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SEC61A1P61619 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SEC61A1P61619 LINC02228-203ENST00000641970 1355 ntBASIC18.05■□□□□ 0.48
SEC61A1P61619 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SEC61A1P61619 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SEC61A1P61619 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
SEC61A1P61619 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SEC61A1P61619 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.05■□□□□ 0.48
SEC61A1P61619 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
SEC61A1P61619 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SEC61A1P61619 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.05■□□□□ 0.48
SEC61A1P61619 KRT18P5-201ENST00000436075 1291 ntBASIC18.05■□□□□ 0.48
SEC61A1P61619 KRT18P14-201ENST00000534205 1250 ntBASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms