Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
AP3S2P59780 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.83■□□□□ 0.45
AP3S2P59780 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP3S2P59780 VGF-203ENST00000611537 1622 ntTSL 5 BASIC17.83■□□□□ 0.45
AP3S2P59780 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP3S2P59780 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP3S2P59780 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP3S2P59780 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
AP3S2P59780 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.83■□□□□ 0.45
AP3S2P59780 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
AP3S2P59780 PVT1-219ENST00000523427 938 ntTSL 3 BASIC17.83■□□□□ 0.44
AP3S2P59780 AC068587.7-201ENST00000641602 218 ntBASIC17.83■□□□□ 0.44
AP3S2P59780 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.83■□□□□ 0.44
AP3S2P59780 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3S2P59780 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3S2P59780 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
AP3S2P59780 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3S2P59780 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
AP3S2P59780 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
AP3S2P59780 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.82■□□□□ 0.44
AP3S2P59780 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
AP3S2P59780 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.82■□□□□ 0.44
AP3S2P59780 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
AP3S2P59780 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
AP3S2P59780 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.82■□□□□ 0.44
AP3S2P59780 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.82■□□□□ 0.44
AP3S2P59780 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC17.82■□□□□ 0.44
AP3S2P59780 U85056.1-201ENST00000616429 682 ntBASIC17.82■□□□□ 0.44
AP3S2P59780 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
AP3S2P59780 DET1-207ENST00000564406 2315 ntTSL 2 BASIC17.82■□□□□ 0.44
AP3S2P59780 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
AP3S2P59780 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
AP3S2P59780 AC003102.1-202ENST00000563394 1796 ntBASIC17.81■□□□□ 0.44
AP3S2P59780 AL162377.1-201ENST00000618844 1793 ntBASIC17.81■□□□□ 0.44
AP3S2P59780 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
AP3S2P59780 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3S2P59780 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3S2P59780 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3S2P59780 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
AP3S2P59780 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.81■□□□□ 0.44
AP3S2P59780 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3S2P59780 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC17.81■□□□□ 0.44
AP3S2P59780 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP3S2P59780 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
AP3S2P59780 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3S2P59780 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
AP3S2P59780 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
AP3S2P59780 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
AP3S2P59780 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3S2P59780 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3S2P59780 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3S2P59780 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
AP3S2P59780 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
AP3S2P59780 KRT18P60-201ENST00000312876 1297 ntBASIC17.8■□□□□ 0.44
AP3S2P59780 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3S2P59780 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP3S2P59780 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC17.8■□□□□ 0.44
AP3S2P59780 AC087239.1-201ENST00000622671 572 ntBASIC17.8■□□□□ 0.44
AP3S2P59780 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.8■□□□□ 0.44
AP3S2P59780 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3S2P59780 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3S2P59780 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3S2P59780 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP3S2P59780 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3S2P59780 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3S2P59780 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
AP3S2P59780 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP3S2P59780 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.79■□□□□ 0.44
AP3S2P59780 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP3S2P59780 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP3S2P59780 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.79■□□□□ 0.44
AP3S2P59780 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP3S2P59780 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
AP3S2P59780 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms