Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN2P57739 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN2P57739 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN2P57739 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.58■□□□□ 0.89
CLDN2P57739 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN2P57739 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN2P57739 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.58■□□□□ 0.89
CLDN2P57739 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN2P57739 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN2P57739 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN2P57739 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN2P57739 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN2P57739 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.58■□□□□ 0.88
CLDN2P57739 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN2P57739 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN2P57739 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN2P57739 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN2P57739 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.57■□□□□ 0.88
CLDN2P57739 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN2P57739 POU5F1P3-201ENST00000428824 1078 ntBASIC20.57■□□□□ 0.88
CLDN2P57739 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.57■□□□□ 0.88
CLDN2P57739 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.57■□□□□ 0.88
CLDN2P57739 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CLDN2P57739 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CLDN2P57739 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN2P57739 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN2P57739 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CLDN2P57739 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
CLDN2P57739 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.56■□□□□ 0.88
CLDN2P57739 VMO1-204ENST00000441199 741 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN2P57739 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLDN2P57739 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.56■□□□□ 0.88
CLDN2P57739 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLDN2P57739 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
CLDN2P57739 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN2P57739 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.55■□□□□ 0.88
CLDN2P57739 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.55■□□□□ 0.88
CLDN2P57739 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN2P57739 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN2P57739 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN2P57739 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN2P57739 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.55■□□□□ 0.88
CLDN2P57739 CYP2T3P-201ENST00000601990 817 ntBASIC20.55■□□□□ 0.88
CLDN2P57739 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.55■□□□□ 0.88
CLDN2P57739 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN2P57739 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CLDN2P57739 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN2P57739 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN2P57739 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CLDN2P57739 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.55■□□□□ 0.88
CLDN2P57739 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.55■□□□□ 0.88
CLDN2P57739 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN2P57739 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CLDN2P57739 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
CLDN2P57739 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.54■□□□□ 0.88
CLDN2P57739 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.54■□□□□ 0.88
CLDN2P57739 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN2P57739 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN2P57739 ECEL1P1-201ENST00000373592 1742 ntBASIC20.54■□□□□ 0.88
CLDN2P57739 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CLDN2P57739 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.54■□□□□ 0.88
CLDN2P57739 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN2P57739 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.54■□□□□ 0.88
CLDN2P57739 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN2P57739 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN2P57739 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN2P57739 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CLDN2P57739 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN2P57739 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN2P57739 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CLDN2P57739 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.53■□□□□ 0.88
CLDN2P57739 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
CLDN2P57739 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.53■□□□□ 0.88
CLDN2P57739 AC007322.3-201ENST00000426526 701 ntBASIC20.53■□□□□ 0.88
CLDN2P57739 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN2P57739 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.53■□□□□ 0.88
CLDN2P57739 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms