Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXG1P55316 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXG1P55316 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXG1P55316 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXG1P55316 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXG1P55316 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXG1P55316 AC006970.2-201ENST00000450065 779 ntBASIC18.28■□□□□ 0.52
FOXG1P55316 AC007322.4-201ENST00000509611 723 ntBASIC18.28■□□□□ 0.52
FOXG1P55316 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
FOXG1P55316 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXG1P55316 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXG1P55316 AC016405.3-201ENST00000607710 860 ntBASIC18.28■□□□□ 0.52
FOXG1P55316 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXG1P55316 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
FOXG1P55316 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.28■□□□□ 0.52
FOXG1P55316 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
FOXG1P55316 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
FOXG1P55316 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
FOXG1P55316 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.28■□□□□ 0.52
FOXG1P55316 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXG1P55316 CYP2T1P-201ENST00000432607 1285 ntBASIC18.27■□□□□ 0.52
FOXG1P55316 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.27■□□□□ 0.52
FOXG1P55316 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.27■□□□□ 0.52
FOXG1P55316 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
FOXG1P55316 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXG1P55316 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.27■□□□□ 0.51
FOXG1P55316 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.27■□□□□ 0.51
FOXG1P55316 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.27■□□□□ 0.51
FOXG1P55316 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXG1P55316 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
FOXG1P55316 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.27■□□□□ 0.51
FOXG1P55316 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.51
FOXG1P55316 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
FOXG1P55316 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXG1P55316 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.26■□□□□ 0.51
FOXG1P55316 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
FOXG1P55316 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXG1P55316 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXG1P55316 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
FOXG1P55316 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
FOXG1P55316 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.26■□□□□ 0.51
FOXG1P55316 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.26■□□□□ 0.51
FOXG1P55316 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
FOXG1P55316 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
FOXG1P55316 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
FOXG1P55316 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.25■□□□□ 0.51
FOXG1P55316 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.24■□□□□ 0.51
FOXG1P55316 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
FOXG1P55316 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXG1P55316 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXG1P55316 HLA-L-209ENST00000420110 1011 ntBASIC18.24■□□□□ 0.51
FOXG1P55316 NCF1B-203ENST00000435988 1254 ntBASIC18.24■□□□□ 0.51
FOXG1P55316 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXG1P55316 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.24■□□□□ 0.51
FOXG1P55316 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
FOXG1P55316 AC005229.4-201ENST00000610085 2198 ntBASIC18.24■□□□□ 0.51
FOXG1P55316 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXG1P55316 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
FOXG1P55316 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXG1P55316 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXG1P55316 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXG1P55316 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXG1P55316 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXG1P55316 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXG1P55316 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXG1P55316 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXG1P55316 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
FOXG1P55316 AC083906.2-201ENST00000511578 360 ntBASIC18.23■□□□□ 0.51
FOXG1P55316 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXG1P55316 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXG1P55316 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms