Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
EPHB3P54753 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.79■■□□□ 1.08
EPHB3P54753 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB3P54753 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB3P54753 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB3P54753 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB3P54753 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
EPHB3P54753 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.78■■□□□ 1.08
EPHB3P54753 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.78■■□□□ 1.08
EPHB3P54753 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
EPHB3P54753 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.78■■□□□ 1.08
EPHB3P54753 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
EPHB3P54753 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 AC066615.1-201ENST00000640911 628 ntBASIC21.78■■□□□ 1.08
EPHB3P54753 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
EPHB3P54753 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.78■■□□□ 1.08
EPHB3P54753 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.78■■□□□ 1.08
EPHB3P54753 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EPHB3P54753 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHB3P54753 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHB3P54753 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.77■■□□□ 1.08
EPHB3P54753 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC21.77■■□□□ 1.08
EPHB3P54753 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHB3P54753 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.77■■□□□ 1.08
EPHB3P54753 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EPHB3P54753 ESRRAP1-201ENST00000400596 1257 ntBASIC21.77■■□□□ 1.08
EPHB3P54753 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.77■■□□□ 1.08
EPHB3P54753 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHB3P54753 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHB3P54753 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EPHB3P54753 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
EPHB3P54753 GOLGA2P6-201ENST00000340929 2049 ntBASIC21.77■■□□□ 1.07
EPHB3P54753 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHB3P54753 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHB3P54753 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHB3P54753 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHB3P54753 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EPHB3P54753 KRT18P68-201ENST00000392293 1000 ntBASIC21.76■■□□□ 1.07
EPHB3P54753 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHB3P54753 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
EPHB3P54753 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.76■■□□□ 1.07
EPHB3P54753 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC21.76■■□□□ 1.07
EPHB3P54753 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EPHB3P54753 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.76■■□□□ 1.07
EPHB3P54753 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
EPHB3P54753 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.76■■□□□ 1.07
EPHB3P54753 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.76■■□□□ 1.07
EPHB3P54753 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.76■■□□□ 1.07
EPHB3P54753 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC21.75■■□□□ 1.07
EPHB3P54753 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.75■■□□□ 1.07
EPHB3P54753 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.75■■□□□ 1.07
EPHB3P54753 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.75■■□□□ 1.07
EPHB3P54753 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.75■■□□□ 1.07
EPHB3P54753 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
EPHB3P54753 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.75■■□□□ 1.07
EPHB3P54753 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
EPHB3P54753 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.75■■□□□ 1.07
EPHB3P54753 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EPHB3P54753 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EPHB3P54753 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHB3P54753 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EPHB3P54753 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHB3P54753 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.74■■□□□ 1.07
EPHB3P54753 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.74■■□□□ 1.07
EPHB3P54753 ADM-205ENST00000528544 586 ntTSL 2 BASIC21.74■■□□□ 1.07
EPHB3P54753 AC008687.6-201ENST00000596318 630 ntBASIC21.74■■□□□ 1.07
EPHB3P54753 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.74■■□□□ 1.07
EPHB3P54753 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
EPHB3P54753 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHB3P54753 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
EPHB3P54753 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.74■■□□□ 1.07
EPHB3P54753 AC116050.2-201ENST00000612102 1779 ntBASIC21.74■■□□□ 1.07
EPHB3P54753 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
EPHB3P54753 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
EPHB3P54753 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.73■■□□□ 1.07
EPHB3P54753 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHB3P54753 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.73■■□□□ 1.07
EPHB3P54753 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
EPHB3P54753 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC21.73■■□□□ 1.07
EPHB3P54753 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
EPHB3P54753 MMAB-206ENST00000540016 945 ntTSL 3 BASIC21.73■■□□□ 1.07
EPHB3P54753 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.73■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms