Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.14■□□□□ 0.98
ATXN3P54252 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATXN3P54252 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
ATXN3P54252 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN3P54252 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.14■□□□□ 0.97
ATXN3P54252 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN3P54252 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ATXN3P54252 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.14■□□□□ 0.97
ATXN3P54252 AC010141.2-201ENST00000452426 721 ntBASIC21.14■□□□□ 0.97
ATXN3P54252 AC098934.4-201ENST00000564127 592 ntBASIC21.14■□□□□ 0.97
ATXN3P54252 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ATXN3P54252 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN3P54252 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN3P54252 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATXN3P54252 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.14■□□□□ 0.97
ATXN3P54252 MKRN4P-201ENST00000444706 1521 ntBASIC21.14■□□□□ 0.97
ATXN3P54252 AC026310.3-201ENST00000625186 2373 ntBASIC21.14■□□□□ 0.97
ATXN3P54252 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.13■□□□□ 0.97
ATXN3P54252 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
ATXN3P54252 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3P54252 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.13■□□□□ 0.97
ATXN3P54252 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
ATXN3P54252 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3P54252 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3P54252 AC008694.1-202ENST00000636953 945 ntBASIC21.13■□□□□ 0.97
ATXN3P54252 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3P54252 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3P54252 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3P54252 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3P54252 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3P54252 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.13■□□□□ 0.97
ATXN3P54252 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.13■□□□□ 0.97
ATXN3P54252 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
ATXN3P54252 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3P54252 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATXN3P54252 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
ATXN3P54252 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATXN3P54252 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ATXN3P54252 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3P54252 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3P54252 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3P54252 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.11■□□□□ 0.97
ATXN3P54252 AC138907.5-202ENST00000569484 235 ntBASIC21.11■□□□□ 0.97
ATXN3P54252 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.11■□□□□ 0.97
ATXN3P54252 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3P54252 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ATXN3P54252 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3P54252 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ATXN3P54252 AP006294.2-201ENST00000641667 209 ntBASIC21.11■□□□□ 0.97
ATXN3P54252 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3P54252 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3P54252 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3P54252 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.11■□□□□ 0.97
ATXN3P54252 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATXN3P54252 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ATXN3P54252 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC21.11■□□□□ 0.97
ATXN3P54252 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ATXN3P54252 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3P54252 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.1■□□□□ 0.97
ATXN3P54252 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3P54252 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC21.1■□□□□ 0.97
ATXN3P54252 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.1■□□□□ 0.97
ATXN3P54252 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3P54252 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3P54252 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3P54252 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.1■□□□□ 0.97
ATXN3P54252 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3P54252 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
ATXN3P54252 MIPEPP3-201ENST00000412105 444 ntBASIC21.1■□□□□ 0.97
ATXN3P54252 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.1■□□□□ 0.97
ATXN3P54252 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.1■□□□□ 0.97
ATXN3P54252 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3P54252 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3P54252 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATXN3P54252 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC21.1■□□□□ 0.97
ATXN3P54252 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.1■□□□□ 0.97
ATXN3P54252 AC055733.4-201ENST00000638462 1354 ntBASIC21.1■□□□□ 0.97
ATXN3P54252 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
ATXN3P54252 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN3P54252 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN3P54252 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
ATXN3P54252 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ATXN3P54252 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
ATXN3P54252 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.09■□□□□ 0.97
ATXN3P54252 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN3P54252 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC21.09■□□□□ 0.97
ATXN3P54252 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.09■□□□□ 0.97
ATXN3P54252 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.09■□□□□ 0.97
ATXN3P54252 TERF1P5-201ENST00000477545 1207 ntBASIC21.09■□□□□ 0.97
ATXN3P54252 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.09■□□□□ 0.97
ATXN3P54252 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms