Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.36■□□□□ 0.53
SRP9P49458 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRP9P49458 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.36■□□□□ 0.53
SRP9P49458 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SRP9P49458 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.35■□□□□ 0.53
SRP9P49458 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.35■□□□□ 0.53
SRP9P49458 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SRP9P49458 ZNRF2P3-201ENST00000424200 374 ntBASIC18.35■□□□□ 0.53
SRP9P49458 AC012414.1-201ENST00000556676 535 ntBASIC18.35■□□□□ 0.53
SRP9P49458 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.35■□□□□ 0.53
SRP9P49458 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.35■□□□□ 0.53
SRP9P49458 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
SRP9P49458 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SRP9P49458 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SRP9P49458 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SRP9P49458 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.35■□□□□ 0.53
SRP9P49458 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.35■□□□□ 0.53
SRP9P49458 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
SRP9P49458 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.34■□□□□ 0.53
SRP9P49458 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP9P49458 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC18.34■□□□□ 0.53
SRP9P49458 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SRP9P49458 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.34■□□□□ 0.53
SRP9P49458 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SRP9P49458 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SRP9P49458 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.34■□□□□ 0.53
SRP9P49458 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SRP9P49458 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
SRP9P49458 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP9P49458 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.34■□□□□ 0.53
SRP9P49458 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SRP9P49458 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRP9P49458 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.34■□□□□ 0.53
SRP9P49458 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.34■□□□□ 0.53
SRP9P49458 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SRP9P49458 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.33■□□□□ 0.53
SRP9P49458 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.33■□□□□ 0.53
SRP9P49458 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.33■□□□□ 0.53
SRP9P49458 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SRP9P49458 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
SRP9P49458 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.33■□□□□ 0.53
SRP9P49458 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.33■□□□□ 0.52
SRP9P49458 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SRP9P49458 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 AL034346.1-201ENST00000568244 1277 ntBASIC18.33■□□□□ 0.52
SRP9P49458 SMUG1P1-201ENST00000590640 811 ntBASIC18.33■□□□□ 0.52
SRP9P49458 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.33■□□□□ 0.52
SRP9P49458 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SRP9P49458 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SRP9P49458 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SRP9P49458 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.32■□□□□ 0.52
SRP9P49458 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
SRP9P49458 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SRP9P49458 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.32■□□□□ 0.52
SRP9P49458 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.32■□□□□ 0.52
SRP9P49458 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.32■□□□□ 0.52
SRP9P49458 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
SRP9P49458 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.32■□□□□ 0.52
SRP9P49458 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.32■□□□□ 0.52
SRP9P49458 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.32■□□□□ 0.52
SRP9P49458 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SRP9P49458 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms