Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
SLC9A3P48764 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC9A3P48764 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.99■□□□□ 0.63
SLC9A3P48764 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC9A3P48764 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SLC9A3P48764 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SLC9A3P48764 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC9A3P48764 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SLC9A3P48764 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC9A3P48764 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.98■□□□□ 0.63
SLC9A3P48764 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.98■□□□□ 0.63
SLC9A3P48764 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SLC9A3P48764 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.98■□□□□ 0.63
SLC9A3P48764 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SLC9A3P48764 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SLC9A3P48764 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.97■□□□□ 0.63
SLC9A3P48764 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC9A3P48764 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC9A3P48764 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
SLC9A3P48764 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC9A3P48764 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC9A3P48764 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
SLC9A3P48764 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC9A3P48764 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.97■□□□□ 0.63
SLC9A3P48764 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.97■□□□□ 0.63
SLC9A3P48764 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SLC9A3P48764 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
SLC9A3P48764 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.97■□□□□ 0.63
SLC9A3P48764 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC9A3P48764 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC9A3P48764 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SLC9A3P48764 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SLC9A3P48764 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SLC9A3P48764 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SLC9A3P48764 FEM1AP1-201ENST00000431297 1995 ntBASIC18.96■□□□□ 0.63
SLC9A3P48764 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 MIR939-201ENST00000401314 82 ntBASIC18.96■□□□□ 0.63
SLC9A3P48764 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC9A3P48764 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
SLC9A3P48764 AC091305.1-201ENST00000479476 895 ntBASIC18.96■□□□□ 0.63
SLC9A3P48764 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.96■□□□□ 0.63
SLC9A3P48764 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC9A3P48764 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC9A3P48764 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
SLC9A3P48764 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC9A3P48764 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.96■□□□□ 0.63
SLC9A3P48764 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.96■□□□□ 0.63
SLC9A3P48764 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SLC9A3P48764 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC9A3P48764 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC9A3P48764 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC9A3P48764 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC9A3P48764 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC9A3P48764 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
SLC9A3P48764 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC9A3P48764 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC9A3P48764 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC9A3P48764 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC9A3P48764 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.95■□□□□ 0.62
SLC9A3P48764 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC9A3P48764 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC9A3P48764 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.95■□□□□ 0.62
SLC9A3P48764 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.95■□□□□ 0.62
SLC9A3P48764 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC9A3P48764 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.95■□□□□ 0.62
SLC9A3P48764 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.95■□□□□ 0.62
SLC9A3P48764 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SLC9A3P48764 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC9A3P48764 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.94■□□□□ 0.62
SLC9A3P48764 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SLC9A3P48764 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
SLC9A3P48764 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC9A3P48764 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
SLC9A3P48764 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC9A3P48764 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SLC9A3P48764 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC9A3P48764 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.94■□□□□ 0.62
SLC9A3P48764 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms